RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 UNQ9370/PRO34162Q6UXP9 181 aa15.49■□□□□ 0.07
PCDHA13-201ENST00000289272 GVQW1Q8N7I0 195 aa15.49■□□□□ 0.07
PCDHA13-201ENST00000289272 OR2D3Q8NGH3 330 aa15.49■□□□□ 0.07
PCDHA13-201ENST00000289272 SLC2A8Q9NY64 477 aa15.49■□□□□ 0.07
PCDHA13-201ENST00000289272 ARL16Q0P5N6 197 aa15.49■□□□□ 0.07
PCDHA13-201ENST00000289272 ZNF385CQ66K41 422 aaPredicted RBP15.49■□□□□ 0.07
PCDHA13-201ENST00000289272 LAMTOR1Q6IAA8 161 aa15.49■□□□□ 0.07
PCDHA13-201ENST00000289272 TIMD4Q96H15 378 aa15.49■□□□□ 0.07
PCDHA13-201ENST00000289272 PLPP3O14495 311 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 EPHA8P29322 1005 aaPredicted RBP15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 MICBQ29980 383 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 POM121L2Q96KW2 1035 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 FUT9Q9Y231 359 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 AQP7P3A6NL99 342 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 RPL13AP40429 203 aaKnown RBP15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 PMCHL1Q16048 86 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 VHLLQ6RSH7 139 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 CHRNA7P36544 502 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 ASB5Q8WWX0 329 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 RDH5Q92781 318 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 RPP25Q9BUL9 199 aaKnown RBP15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 CACNA1CQ13936 2221 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 OR3A4PP47883 348 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 TLNRD1Q9H1K6 362 aa15.48■□□□□ 0.07
PCDHA13-201ENST00000289272 MTURNQ8N3F0 131 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 C8orf44Q96CB5 159 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 GGACTQ9BVM4 153 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 FAM221AA4D161 298 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 GEMIN2O14893 280 aaKnown RBP15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 OTPQ5XKR4 325 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 ATG4DQ86TL0 474 aaPredicted RBP15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 C1orf210Q8IVY1 113 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 NRTNQ99748 197 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 DUSP13Q9UII6 198 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 IGHV1OR21-1A0A087WYE8 117 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 C11orf94C9JXX5 98 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 NRG2O14511 850 aaPredicted RBP15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 RPS4Y1P22090 263 aaKnown RBP15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 LSM6P62312 80 aaKnown RBP15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 POLR2GP62487 172 aaKnown RBP eCLIP15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 PRR27Q6MZM9 219 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 FAM173AQ9BQD7 235 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 C12orf49Q9H741 205 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 H3BP45 60 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 FAM219AQ8IW50 185 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 ZBTB34Q8NCN2 500 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 OR2V1Q8NHB1 315 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 PGLYRP3Q96LB9 341 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 ADAT1Q9BUB4 502 aaKnown RBP15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 DDA1Q9BW61 102 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 SH2D2AQ9NP31 389 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 GSN-AS1Q9NRJ2 163 aa15.47■□□□□ 0.07
PCDHA13-201ENST00000289272 TRAV17A0A0B4J275 112 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 AQP7O14520 342 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 ZNF253O75346 499 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 MT-CO3P00414 261 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 FOXF1Q12946 379 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 LTC4SQ16873 150 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 SFTPA1Q8IWL2 248 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 TBX15Q96SF7 602 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 TPPP3Q9BW30 176 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 COMMD5Q9GZQ3 224 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 PARP14Q460N5 1801 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 A0A1W2PPV9 198 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 PAX5Q02548 391 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 LINC00596Q86U02 117 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 M0R2Z0 102 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 OR5AC2Q9NZP5 309 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 CACNG5Q9UF02 275 aa15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 ZFC3H1O60293 1989 aaKnown RBP15.46■□□□□ 0.07
PCDHA13-201ENST00000289272 COL9A1P20849 921 aa15.46■□□□□ 0.06
PCDHA13-201ENST00000289272 MRPL24Q96A35 216 aaKnown RBP15.46■□□□□ 0.06
PCDHA13-201ENST00000289272 UQCR10Q9UDW1 63 aa15.46■□□□□ 0.06
PCDHA13-201ENST00000289272 SIRPB1O00241 398 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 BRS3P32247 399 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 GNG3P63215 75 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 MESTQ5EB52 335 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 ADAD2Q8NCV1 583 aaKnown RBP15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 ASB10Q8WXI3 467 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 GPX7Q96SL4 187 aaPredicted RBP15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 SPRY1O43609 319 aaPredicted RBP15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 TCF21O43680 179 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 ATP6V0CP27449 155 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 AGFG1P52594 562 aaKnown RBP15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 MLF1P58340 268 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 OR1L4Q8NGR5 311 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 MAP1LC3CQ9BXW4 147 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 HSPB8Q9UJY1 196 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 KCNAB3O43448 404 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 CT62P0C5K7 136 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 DEFB127Q9H1M4 99 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 KLK13Q9UKR3 277 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 CRYAAP02489 173 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 CD74P04233 296 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 PLPPR5Q32ZL2 321 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 C6orf201Q7Z4U5 140 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 TRAV8-7A0A075B6U6 113 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 MOSPD3O75425 235 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 SMIM21Q3B7S5 101 aa15.45■□□□□ 0.06
PCDHA13-201ENST00000289272 PLAC9Q5JTB6 97 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms