RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 RPL7L1Q6DKI1 246 aaKnown RBP16.25■□□□□ 0.19
PCDH1-201ENST00000287008 CLEC2AQ6UVW9 174 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 OR4F17Q8NGA8 305 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 WNT2BQ93097 391 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 HSD17B10Q99714 261 aaKnown RBP16.25■□□□□ 0.19
PCDH1-201ENST00000287008 PPIAL4EA0A075B759 164 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 TRDCB7Z8K6 153 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 PPIAL4DF5H284 164 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 PPIAL4FP0DN26 164 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 INPP5JQ15735 1006 aaPredicted RBP16.25■□□□□ 0.19
PCDH1-201ENST00000287008 TNXAQ16473 311 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 OR52L2PQ8NGH6 319 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 CHST5Q9GZS9 411 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 CTDSP1Q9GZU7 261 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 LPAR2Q9HBW0 351 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 PPIAL4AQ9Y536 164 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 INSIG2Q9Y5U4 225 aa16.25■□□□□ 0.19
PCDH1-201ENST00000287008 ROS1P08922 2347 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 DBX1A6NMT0 343 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 SCGB1D1O95968 90 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 NDUFA6P56556 154 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 RELL2Q8NC24 303 aaPredicted RBP16.24■□□□□ 0.19
PCDH1-201ENST00000287008 SPSB2Q99619 263 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 OPN1MWP04001 364 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 OPN1MW2P0DN77 364 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 OPN1MW3P0DN78 364 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 HNF1AP20823 631 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 TMEM267Q0VDI3 215 aaPredicted RBP16.24■□□□□ 0.19
PCDH1-201ENST00000287008 DLEC1Q9Y238 1755 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 SNRNP200O75643 2136 aaKnown RBP16.24■□□□□ 0.19
PCDH1-201ENST00000287008 PRR19A6NJB7 356 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 ONECUT2O95948 504 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 ZBTB37Q5TC79 503 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 GVQW1Q8N7I0 195 aa16.24■□□□□ 0.19
PCDH1-201ENST00000287008 SLC38A11Q08AI6 406 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 EXOSC2Q13868 293 aaKnown RBP16.23■□□□□ 0.19
PCDH1-201ENST00000287008 HLXQ14774 488 aaPredicted RBP16.23■□□□□ 0.19
PCDH1-201ENST00000287008 C11orf87Q6NUJ2 197 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 OPN3Q9H1Y3 402 aaPredicted RBP16.23■□□□□ 0.19
PCDH1-201ENST00000287008 ARPC4-TTLL3A0A0A6YYG9 625 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 DUS4LO95620 317 aaKnown RBP16.23■□□□□ 0.19
PCDH1-201ENST00000287008 ZNF574Q6ZN55 896 aaPredicted RBP16.23■□□□□ 0.19
PCDH1-201ENST00000287008 LSM2Q9Y333 95 aaKnown RBP16.23■□□□□ 0.19
PCDH1-201ENST00000287008 CEACAM1P13688 526 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 CTSSP25774 331 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 PDZK1IP1Q13113 114 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 CDCP2Q5VXM1 449 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 OR13D1Q8NGV5 346 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 NTNG2Q96CW9 530 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 RASL11BQ9BPW5 248 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 NUDT16L1Q9BRJ7 211 aaKnown RBP16.23■□□□□ 0.19
PCDH1-201ENST00000287008 OR5H1A6NKK0 313 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 SOCS1O15524 211 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 RPL31P62899 125 aaKnown RBP16.23■□□□□ 0.19
PCDH1-201ENST00000287008 ZCCHC14Q8WYQ9 949 aaKnown RBP16.23■□□□□ 0.19
PCDH1-201ENST00000287008 ZMIZ1Q9ULJ6 1067 aa16.23■□□□□ 0.19
PCDH1-201ENST00000287008 POLEQ07864 2286 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 TSTD3H0UI37 97 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 OR5AC1P0C628 307 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 MVDP53602 400 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 RAG2P55895 527 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 AVPI1Q5T686 147 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 ST8SIA2Q92186 375 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 PPP1R2P9O14990 202 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 BCL3P20749 454 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 C8orf82Q6P1X6 216 aaPredicted RBP16.22■□□□□ 0.19
PCDH1-201ENST00000287008 BCL2L2Q92843 193 aaPredicted RBP16.22■□□□□ 0.19
PCDH1-201ENST00000287008 DHRS9Q9BPW9 319 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 RFPL4AA6NLU0 287 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 RFPL4AL1F8VTS6 287 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 DCTN6O00399 190 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 BCL2L11O43521 198 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 FOXB2Q5VYV0 432 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 TMUB1Q9BVT8 246 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 STARD10Q9Y365 291 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 IFI6P09912 130 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 COX6A1P12074 109 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 GABRA6Q16445 453 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 ATP1A1-AS1Q5TC04 95 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 V9GYS6 101 aa16.22■□□□□ 0.19
PCDH1-201ENST00000287008 ATAD5Q96QE3 1844 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 H0Y8G0 127 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 PTP4A3O75365 173 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 ASAH2BP0C7U1 165 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 FNDC7Q5VTL7 733 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 ABHD1Q96SE0 405 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 DIRC2Q96SL1 478 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 OR1A1Q9P1Q5 309 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 KCNMB2Q9Y691 235 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 SERTM2A0A1B0GWG4 89 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 DNASE2O00115 360 aaPredicted RBP16.21■□□□□ 0.19
PCDH1-201ENST00000287008 SMIM17P0DL12 118 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 PMELP40967 661 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 GGNBP1Q5YKI7 109 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 TMEM208Q9BTX3 173 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 COL11A1P12107 1806 aaPredicted RBP16.21■□□□□ 0.19
PCDH1-201ENST00000287008 LIAT1Q6ZQX7 453 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 SLC16A12Q6ZSM3 486 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 C14orf79Q96F83 325 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 GPA33Q99795 319 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms