RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 IGLV3-12A0A075B6K2 115 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TRAV1-2A0A0B4J238 106 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 FTCDNL1E5RQL4 147 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SCGB1D1O95968 90 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 HOXC12P31275 282 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TAGLN2P37802 199 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RAB1AP62820 205 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SOHLH1Q5JUK2 328 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 GGNBP1Q5YKI7 109 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR56B1Q8NGI3 324 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 HAVCR1Q96D42 359 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ELOVL1Q9BW60 279 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RCC2Q9P258 522 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PRSS50Q9UI38 385 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 MYO9AB2RTY4 2548 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 C10orf142B7Z368 130 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR8U9P0C7N5 309 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 NTF4P34130 210 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PTGDSP41222 190 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RAB4BP61018 213 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 UBE2KP61086 200 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 EGR3Q06889 387 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ZFP36L1Q07352 338 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 DHRS2Q13268 280 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 KISS1Q15726 138 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 THNSL2Q86YJ6 484 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 FBXL14Q8N1E6 418 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR10S1Q8NGN2 331 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR8U1Q8NH10 309 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ZNF519Q8TB69 540 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SLC25A43Q8WUT9 341 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ZNF552Q9H707 407 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 K7EPK0 472 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ADAP1O75689 374 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PMS2P2O95744 297 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 IKZF1Q13422 519 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SLC10A1Q14973 349 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ADGRE4PQ86SQ3 457 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 MRPL41Q8IXM3 137 aaKnown RBP12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 FAM71E2Q8N5Q1 922 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR10AD1Q8NGE0 317 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SEH1LQ96EE3 360 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CHD3Q12873 2000 aaKnown RBP12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 EREGO14944 169 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CD59P13987 128 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 EIF5AP63241 154 aaKnown RBP12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ABCA11PQ4W5N1 156 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CARFQ8N187 725 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR5H2Q8NGV7 314 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR51F2Q8NH61 342 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR2V1Q8NHB1 315 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 IMMP1LQ96LU5 166 aa12.32□□□□□ -0.44
TNFRSF11A-201ENST00000269485 A0A1W2PNU3 283 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 NPIPB7O75200 414 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 C1QL1O75973 258 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 FTH1P19P0C7X4 201 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CALCRP30988 508 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ALDH3B1P43353 468 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 EMC4Q5J8M3 183 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TMEM251Q8N6I4 163 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TPRX1Q8N7U7 411 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ZNF610Q8N9Z0 462 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SUMF2Q8NBJ7 301 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RRNAD1Q96FB5 475 aaKnown RBP12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TAF9BQ9HBM6 251 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 LOC102724200A0A096LPH7 203 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RNF222A6NCQ9 220 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SLC17A2O00624 439 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 NTN3O00634 580 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ERCC1P07992 297 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 VSIG8P0DPA2 414 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CD46P15529 392 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 APLNRP35414 380 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 UBE2NP61088 152 aaKnown RBP12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SLC22A24Q8N4F4 322 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR56B2PQ8NGI1 322 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR5L1Q8NGL2 311 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 APH1AQ96BI3 265 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PACRGQ96M98 296 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR10A2Q9H208 303 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CBLN4Q9NTU7 201 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 GLSO94925 669 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 H2AFB1P0C5Y9 115 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PGA4P0DJD7 388 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PGA3P0DJD8 388 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 GLRA1P23415 457 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PSMB6P28072 239 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 LPAR6P43657 344 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 FHITP49789 147 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 HIST2H3PS2Q5TEC6 136 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 FDCSPQ8NFU4 85 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR5AP2Q8NGF4 316 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SNX22Q96L94 193 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CNTNAP3Q9BZ76 1288 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CHRNA10Q9GZZ6 450 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SEBOXQ9HB31 216 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 IL36RNQ9UBH0 155 aa12.31□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RPS2P15880 293 aaKnown RBP12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CSRP2Q16527 193 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms