RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 SH2D2AQ9NP31 389 aa7.39□□□□□ -1.23
SNCAIP-201ENST00000261367 GABRQQ9UN88 632 aa7.39□□□□□ -1.23
SNCAIP-201ENST00000261367 PLXNB2O15031 1838 aa7.39□□□□□ -1.23
SNCAIP-201ENST00000261367 LTBP3Q9NS15 1303 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 PMS2P1A4D2B8 440 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 RNF222A6NCQ9 220 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 MPPED1O15442 326 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 MPDU1O75352 247 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 GJB3O75712 270 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 ONECUT2O95948 504 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 AMY1AP04745 511 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 IRF2P14316 349 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 PMP22Q01453 160 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 HNRNPA1L2Q32P51 320 aaKnown RBP7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 ZNF740Q8NDX6 193 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 SGMS2Q8NHU3 365 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 INSM2Q96T92 566 aaPredicted RBP7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 TXNRD2Q9NNW7 524 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 SMPD2O60906 423 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 SRSF4Q08170 494 aaKnown RBP7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 METRNLQ641Q3 311 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 TMEM136Q6ZRR5 245 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 RNASEH2CQ8TDP1 164 aaKnown RBP7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 WDYHV1Q96HA8 205 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 PCGF1Q9BSM1 259 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 STARD10Q9Y365 291 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 TIMM9Q9Y5J7 89 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 RALGAPA2Q2PPJ7 1873 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 TSC2P49815 1807 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 DNAJC25-GNG10A0A024R161 153 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 C19orf67A6NJJ6 358 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 IDSB3KWA1 339 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 ALOX12BO75342 701 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 BTCP35070 178 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 RIGQ13278 110 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 CST6Q15828 149 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 ASTLQ6HA08 431 aaPredicted RBP7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 ZNF880Q6PDB4 577 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 TRAT1Q6PIZ9 186 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 CYP2G1PQ6ZSU1 146 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 PRR18Q8N4B5 295 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 EDARADDQ8WWZ3 215 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 AQP3Q92482 292 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 ZNF707Q96C28 371 aaPredicted RBP7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 TRBV5-7A0A0A0MS05 114 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 H0YGG7 62 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 RAB29O14966 203 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 GCM2O75603 506 aaPredicted RBP7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 SNCGO76070 127 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 IFI6P09912 130 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 PSMB5P28074 263 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 SHBQ15464 509 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 ZBTB34Q8NCN2 500 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 ADAD2Q8NCV1 583 aaKnown RBP7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 DNAJA3Q96EY1 480 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 NDFIP1Q9BT67 221 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 APOOQ9BUR5 198 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 TECRQ9NZ01 308 aaKnown RBP7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 KLK13Q9UKR3 277 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 PPIL1Q9Y3C6 166 aa7.38□□□□□ -1.23
SNCAIP-201ENST00000261367 EYSQ5T1H1 3165 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST1H2BKO60814 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 NKX2-2O95096 273 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST1H2BJP06899 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 FAM87AP0C7U9 286 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 LINC00869P0C866 280 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST1H2BOP23527 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST1H2BBP33778 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 CEBPDP49716 269 aaPredicted RBP7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 TDGF1P3P51864 188 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 MLF1P58340 268 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST1H2BDP58876 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST1H2BCP62807 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 UBE2V1Q13404 147 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST2H2BEQ16778 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 C1orf100Q5SVJ3 147 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST1H2BHQ93079 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST1H2BNQ99877 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST1H2BMQ99879 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HIST1H2BLQ99880 126 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 FAM173AQ9BQD7 235 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 MRPL18Q9H0U6 180 aaKnown RBP7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 FRRS1LQ9P0K9 344 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HSF4Q9ULV5 492 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 DPRXA6NFQ7 191 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 DUX1O43812 170 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 SNAI1O95863 264 aaPredicted RBP7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HLA-DRB1P01911 266 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 IER3P46695 156 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 SNAI3Q3KNW1 292 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 TMEM211Q6ICI0 200 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 Q8IYB0 196 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 BCORP1Q8N888 145 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 OR5D13Q8NGL4 314 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 OR1L4Q8NGR5 311 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 MUCL1Q96DR8 90 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 DEFB118Q96PH6 123 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 TMEM70Q9BUB7 260 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 MMP25Q9NPA2 562 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms