RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 HLA-GP17693 338 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 CYB561P49447 251 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 RUNX1Q01196 453 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 FUT7Q11130 342 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 RTL8BQ17RB0 113 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 SLC25A30Q5SVS4 291 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 C1QL3Q5VWW1 255 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 ZNF707Q96C28 371 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 H3BVH4 76 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 DHHO43323 396 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 CXCL13O43927 109 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 FAM87AP0C7U9 286 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 CD46P15529 392 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 CD82P27701 267 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 MYBPHQ13203 477 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 CXorf67Q86X51 503 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 OR1P1Q8NH06 330 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 ICAM5Q9UMF0 924 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 CENPVL1A0A0U1RR11 272 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 H0YL77 283 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 GCM2O75603 506 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 RHBDL1O75783 438 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 VAMP5O95183 116 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 CISD3P0C7P0 127 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 CDX1P47902 265 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 FBLIM1Q8WUP2 373 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 NKX2-6A6NCS4 301 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 OR5B21A6NL26 309 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 FGF2P09038 288 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 GLB1P16278 677 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 JMJD6Q6NYC1 403 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 OR10X1Q8NGY0 326 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 MRGPRX4Q96LA9 322 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 RARRES2Q99969 163 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 LY75O60449 1722 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 NKX6-3A6NJ46 265 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 MBPP02686 304 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 H2BFSP57053 126 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 TAS2R60P59551 318 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 LSRQ86X29 649 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 PCGF1Q9BSM1 259 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 ANGPTL4Q9BY76 406 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 WDR13Q9H1Z4 485 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 MANBALQ9NQG1 85 aa8.62□□□□□ -1.03
CTDSPL2-201ENST00000260327 RP1L1Q8IWN7 2480 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 SEC16AO15027 2179 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 MPTX1A8MV57 137 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 FCGR3BO75015 233 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 SLC35B1P78383 322 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 EIF4EBP2Q13542 120 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 ZIC1Q15915 447 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 TMEM240Q5SV17 173 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 LEMD1Q68G75 181 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 MMP17Q9ULZ9 603 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 ATAD5Q96QE3 1844 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 PQLC2LA1A4F0 135 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 FAM3BP58499 235 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 BPIFA4PQ86YQ2 179 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 OR1K1Q8NGR3 316 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 OR1L4Q8NGR5 311 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 OR4C12Q96R67 309 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 HRKO00198 91 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 ALKBH6Q3KRA9 238 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 ZNF770Q6IQ21 691 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 MARVELD3Q96A59 401 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 SDHCQ99643 169 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 DECR2Q9NUI1 292 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 IFITM10A6NMD0 228 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 SEC11BP0C7V7 166 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 ZNF343Q6P1L6 599 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 MRPL30Q8TCC3 161 aaKnown RBP8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 RAB24Q969Q5 203 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 POLR2AP24928 1970 aaKnown RBP8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 A6NDN8 102 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 GCGP01275 180 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 ADH4P08319 380 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 GNG10P50151 68 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 MESTQ5EB52 335 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 RFESDQ8TAC1 157 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 BCL2L2Q92843 193 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 TMEM147Q9BVK8 224 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 TMEM140Q9NV12 185 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 ST6GALNAC2Q9UJ37 374 aa8.61□□□□□ -1.03
CTDSPL2-201ENST00000260327 CBR3O75828 277 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 DMWDQ09019 674 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 EXT1Q16394 746 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 OR1N1Q8NGS0 311 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 NDFIP1Q9BT67 221 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 IGHV3-43A0A0B4J1X8 118 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 IGHV3-13P01766 116 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 IGHV3-7P01780 117 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 HLA-DQB1P01920 261 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 IGHV3-43DP0DP04 118 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 PABPC1L2AQ5JQF8 200 aa8.6□□□□□ -1.03
CTDSPL2-201ENST00000260327 SMIM12Q96EX1 92 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms