RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 FCARP24071 287 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 RND3P61587 244 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 KHDC3LQ587J8 217 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 ZNF468Q5VIY5 522 aaPredicted RBP13.04□□□□□ -0.32
KCTD3-201ENST00000259154 DPPA3Q6W0C5 159 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 ZNF100Q8IYN0 542 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 ST6GALNAC3Q8NDV1 305 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 TREM2Q9NZC2 230 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 PTRH2Q9Y3E5 179 aaKnown RBP13.04□□□□□ -0.32
KCTD3-201ENST00000259154 SPTY2D1-AS1A0A0U1RR47 76 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 A0A1W2PPC4 97 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 EPOPA6NHQ4 379 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 EIF4E2O60573 245 aaKnown RBP13.04□□□□□ -0.32
KCTD3-201ENST00000259154 PRF1P14222 555 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 KITLGP21583 273 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 SLC35B1P78383 322 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 ZNF816Q0VGE8 651 aaPredicted RBP13.04□□□□□ -0.32
KCTD3-201ENST00000259154 SPATA46Q5T0L3 261 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 BIVMQ86UB2 503 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 ANXA10Q9UJ72 324 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 MAP1LC3B2A6NCE7 125 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 DHRS7CA6NNS2 312 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 HES3Q5TGS1 186 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 SLC25A43Q8WUT9 341 aaPredicted RBP13.04□□□□□ -0.32
KCTD3-201ENST00000259154 MCHR2Q969V1 340 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 OR6C1Q96RD1 312 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 MAP1LC3BQ9GZQ8 125 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 PILRAQ9UKJ1 303 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 TRAPPC1Q9Y5R8 145 aa13.04□□□□□ -0.32
KCTD3-201ENST00000259154 SIRPB1O00241 398 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 CD8AP01732 235 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 S100A7P31151 101 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 CDX1P47902 265 aaPredicted RBP13.03□□□□□ -0.32
KCTD3-201ENST00000259154 ZNF133P52736 654 aaPredicted RBP13.03□□□□□ -0.32
KCTD3-201ENST00000259154 UNC119Q13432 240 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 RNF144BQ7Z419 303 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 C1QL2Q7Z5L3 287 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 HOGA1Q86XE5 327 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 FAM117AQ9C073 453 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 CADP27708 2225 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 A0A1W2PQF6 199 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 SERPINE3A8MV23 424 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 J3QRE1 110 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 M0R143 59 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 RAB4AP20338 218 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 EDDM3AQ14507 147 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.03□□□□□ -0.32
KCTD3-201ENST00000259154 TDHQ8IZJ6 230 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 DMBX1Q8NFW5 382 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 SIRT7Q9NRC8 400 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 ERRFI1Q9UJM3 462 aaPredicted RBP13.03□□□□□ -0.32
KCTD3-201ENST00000259154 DMRT1Q9Y5R6 373 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 TRBV5-7A0A0A0MS05 114 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 TLCD2A6NGC4 264 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 ZFAND5O76080 213 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 TCN2P20062 427 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 CD27P26842 260 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 TCL1AP56279 114 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 FAM58AQ8N1B3 248 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 ARHGEF39Q8N4T4 335 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 VN1R17PQ8TDU5 208 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 LRRC61Q9BV99 259 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 KCNIP1Q9NZI2 227 aa13.03□□□□□ -0.32
KCTD3-201ENST00000259154 METTL1Q9UBP6 276 aaKnown RBP13.03□□□□□ -0.32
KCTD3-201ENST00000259154 CLEC18AA5D8T8 446 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 KIAA1324LA8MWY0 1029 aaPredicted RBP13.02□□□□□ -0.32
KCTD3-201ENST00000259154 PTBP3O95758 552 aaKnown RBP13.02□□□□□ -0.32
KCTD3-201ENST00000259154 GRPP07492 148 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 PGA3P0DJD8 388 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 EDDM3BP56851 147 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 NAAAQ02083 359 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 EGR4Q05215 589 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 GGTLC2Q14390 218 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 CLEC18CQ8NCF0 446 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 OR10G3Q8NGC4 313 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 OR10J5Q8NHC4 309 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 HEYLQ9NQ87 328 aaPredicted RBP13.02□□□□□ -0.32
KCTD3-201ENST00000259154 CACNG5Q9UF02 275 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 CREBBPQ92793 2442 aa13.02□□□□□ -0.32
KCTD3-201ENST00000259154 DCAF7P61962 342 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 PLAURQ03405 335 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 PYY3Q5JQD4 70 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 THEM4Q5T1C6 240 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 C19orf25Q9UFG5 118 aaPredicted RBP13.02□□□□□ -0.33
KCTD3-201ENST00000259154 CARHSP1Q9Y2V2 147 aaKnown RBP13.02□□□□□ -0.33
KCTD3-201ENST00000259154 C3orf85A0A1B0GTC6 90 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 ZNF729A6NN14 1252 aaPredicted RBP13.02□□□□□ -0.33
KCTD3-201ENST00000259154 LAMTOR5O43504 91 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 SNCAP37840 140 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 FOXK1P85037 733 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 ECH1Q13011 328 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 EIF4E3Q8N5X7 224 aaKnown RBP13.02□□□□□ -0.33
KCTD3-201ENST00000259154 OR10A7Q8NGE5 316 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 SCARF2Q96GP6 870 aaPredicted RBP13.02□□□□□ -0.33
KCTD3-201ENST00000259154 ADGRG7Q96K78 797 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 PCGF1Q9BSM1 259 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 CLCF1Q9UBD9 225 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 CACFD1Q9UGQ2 172 aa13.02□□□□□ -0.33
KCTD3-201ENST00000259154 IGKV1D-43A0A0B4J1Z2 117 aa13.01□□□□□ -0.33
KCTD3-201ENST00000259154 ZNF737O75373 536 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms