RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 FGF12P61328 243 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 LY6DQ14210 128 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 AADACL4Q5VUY2 407 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 ADAMTS17Q8TE56 1095 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 A1L4Q6 167 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 AKR7A2O43488 359 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 CST4P01036 141 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 NQO2P16083 231 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 CD80P33681 288 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 PIGPP57054 158 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 Q3ZCU0 254 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 FAM166AQ6J272 317 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 LINC01560Q8TB33 94 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 DCTN5Q9BTE1 182 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 OR2D2Q9H210 308 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 AUNIPQ9H7T9 357 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 JPT1Q9UK76 154 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 TCRBP04435 133 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 THBDP07204 575 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 IZUMO4Q1ZYL8 232 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 TMEM128Q5BJH2 165 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 OR2T10Q8NGZ9 312 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 PLA2G12AQ9BZM1 189 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 TMEM106BQ9NUM4 274 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 CLEC2DQ9UHP7 191 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 PRRC2BQ5JSZ5 2229 aaKnown RBP11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 SNRNP70P08621 437 aaKnown RBP11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 TRAPPC2P0DI81 140 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 TRAPPC2BP0DI82 140 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 DEFA5Q01523 94 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 MGAT2Q10469 447 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 SSX9Q7RTT3 188 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 SKA3Q8IX90 412 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 DERL3Q96Q80 235 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 SLC45A2Q9UMX9 530 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 DTX4Q9Y2E6 619 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 A0A0G2JLM5 398 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 RBP4P02753 201 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 PMELP40967 661 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 LPAR6P43657 344 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 MMP15P51511 669 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 SIAH3Q8IW03 269 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 POFUT1Q9H488 388 aa11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 PLEKHB1Q9UF11 243 aaPredicted RBP11.66□□□□□ -0.54
PRPF38A-201ENST00000257181 TRAV20A0A0B4J274 112 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 ZC3H12DA2A288 527 aaKnown RBP11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 IGHG3P01860 377 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 ROM1Q03395 351 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 GATA6Q92908 595 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 TMEM208Q9BTX3 173 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 PARD6AQ9NPB6 346 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 SNCGO76070 127 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 RAB4BP61018 213 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 COL10A1Q03692 680 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 BCL2L2Q92843 193 aaPredicted RBP11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 SNRNP40Q96DI7 357 aaKnown RBP11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 HSBP1L1C9JCN9 74 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 GNG7O60262 68 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 OR2A4O95047 310 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 OPRK1P41145 380 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 HCCSP53701 268 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 LYG2Q86SG7 212 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 KLF14Q8TD94 323 aaPredicted RBP11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 MRPL24Q96A35 216 aaKnown RBP11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 OR2A7Q96R45 310 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 AUP1Q9Y679 476 aa11.65□□□□□ -0.54
PRPF38A-201ENST00000257181 CDRT15L2A8MXV6 281 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 M0QYG6 137 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 OR2F2O95006 317 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 IGHA1P01876 353 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 ISG15P05161 165 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 GIPP09681 153 aaPredicted RBP11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 HIST1H1EP10412 219 aaKnown RBP11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 GNLYP22749 145 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 EVX1P49640 407 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 CCL8P80075 99 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 OR2F1Q13607 317 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 ABHD14AQ9BUJ0 271 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 PLAC1Q9HBJ0 212 aa11.65□□□□□ -0.55
PRPF38A-201ENST00000257181 F5P12259 2224 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 SPAG17Q6Q759 2223 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 OPRL1P41146 370 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 PERPQ96FX8 193 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 MRPS18AQ9NVS2 196 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 BEX4Q9NWD9 120 aaPredicted RBP11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 CLEC18AA5D8T8 446 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 BCL3P20749 454 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 MPV17P39210 176 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 CLEC18CQ8NCF0 446 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 NMES1Q9C002 83 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 WDR61Q9GZS3 305 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 PLSCR4Q9NRQ2 329 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 RAB19A4D1S5 217 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 TMEM235A6NFC5 223 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 OPN1MWP04001 364 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 OPN1MW2P0DN77 364 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 OPN1MW3P0DN78 364 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 MMDQ15546 238 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 RBPMS2Q6ZRY4 209 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms