RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 EMP1P54849 157 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 LGALS4P56470 323 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 SLC25A30Q5SVS4 291 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 METRNLQ641Q3 311 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 ZNF770Q6IQ21 691 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 RNF165Q6ZSG1 346 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR4F17Q8NGA8 305 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 ALKBH7Q9BT30 221 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 WDR13Q9H1Z4 485 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 MCM3APO60318 1980 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 IGSF23A1L1A6 192 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 P01737 135 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 HBZP02008 142 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 MMP9P14780 707 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 CD38P28907 300 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 UBE2L3P68036 154 aaKnown RBP11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 KMT5CQ86Y97 462 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 LRRC75AQ8NAA5 344 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 HMGCLL1Q8TB92 370 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 FGF14Q92915 247 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 NDUFAF3Q9BU61 184 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 MRPL13Q9BYD1 178 aaKnown RBP11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 DOCK1Q14185 1865 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 SPRY1O43609 319 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 TNFRSF4P43489 277 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 RIPPLY2Q5TAB7 128 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 SSX8Q7RTT4 187 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 TMEM183AQ8IXX5 376 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 C5orf17Q8NAS9 161 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 OXGR1Q96P68 337 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 PCGF1Q9BSM1 259 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 UBE2ZQ9H832 354 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 DNAJC13O75165 2243 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 PRRT4C9JH25 899 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 PDCD6O75340 191 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 YPEL5P62699 121 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 SMAD4Q13485 552 aaKnown RBP11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 OTPQ5XKR4 325 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 CNRIP1Q96F85 164 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 TMEM56Q96MV1 263 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 GNB4Q9HAV0 340 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 PDFQ9HBH1 243 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 TMEM202A6NGA9 273 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 CDKN2AP42771 156 aaKnown RBP11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 SERF2P84101 59 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 MRPL24Q96A35 216 aaKnown RBP11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 RAB37Q96AX2 223 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 FAM206AQ9NX38 181 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 ANXA10Q9UJ72 324 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 ICAM5Q9UMF0 924 aa11.68□□□□□ -0.54
PCDHGA3-201ENST00000253812 CDC14BO60729 498 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 IGFBP7Q16270 282 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 RHBDD1Q8TEB9 315 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 C11orf40Q8WZ69 217 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 EID2BQ96D98 161 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 ALG14Q96F25 216 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 PARLQ9H300 379 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 P4HTMQ9NXG6 502 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 MTCH2Q9Y6C9 303 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 SHANK3Q9BYB0 1731 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 DHHO43323 396 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 HLA-DQA1P01909 254 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 C20orf196Q8IYI0 205 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR10AD1Q8NGE0 317 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 ZFP64Q9NPA5 681 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 MBD1Q9UIS9 605 aaPredicted RBP11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 EPPINO95925 133 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 FAM157CP0CG43 387 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 RCC1P18754 421 aaPredicted RBP11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 MFAP2P55001 183 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 KIAA0040Q15053 153 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 C9orf50Q5SZB4 431 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR10X1Q8NGY0 326 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 CNTD2Q9H8S5 307 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 ZDHHC8Q9ULC8 765 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 SPTBN2O15020 2390 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 A0A0B4J2E0 115 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 A0A1B0GX12 115 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 GCSHP23434 173 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 COL8A1P27658 744 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 DCAF12L2Q5VW00 463 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR11H4Q8NGC9 324 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 KIR3DX1Q9H7L2 352 aa11.67□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR10S1Q8NGN2 331 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 TXNDC17Q9BRA2 123 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 NGBQ9NPG2 151 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 LOC390937A0A1W2PQ73 354 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 GNB1P62873 340 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 MAJINQ3KP22 176 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 WNT2BQ93097 391 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 GAL3ST2Q9H3Q3 398 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 ZNF391Q9UJN7 358 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 CES1P1Q9UKY3 287 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 MRPS2Q9Y399 296 aaKnown RBP11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 POLR2AP24928 1970 aaKnown RBP11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 TMEM30CPA0ZSE6 113 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 IDSB3KWA1 339 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 K7ESM1 405 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms