RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 ID1P41134 155 aa11.77□□□□□ -0.53
NEK9-201ENST00000238616 RELBQ01201 579 aa11.77□□□□□ -0.53
NEK9-201ENST00000238616 C16orf92Q96LL3 132 aa11.77□□□□□ -0.53
NEK9-201ENST00000238616 OR6C3Q9NZP0 311 aa11.77□□□□□ -0.53
NEK9-201ENST00000238616 RALYQ9UKM9 306 aaKnown RBP11.77□□□□□ -0.53
NEK9-201ENST00000238616 TMEM262E9PQX1 116 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 HOXC4P09017 264 aaPredicted RBP11.76□□□□□ -0.53
NEK9-201ENST00000238616 OR5AC1P0C628 307 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 REG1BP48304 166 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 FMODQ06828 376 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 FZD5Q13467 585 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 FAM53BQ14153 422 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 MRPL13Q9BYD1 178 aaKnown RBP11.76□□□□□ -0.53
NEK9-201ENST00000238616 KCNK15Q9H427 330 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 TAF1LQ8IZX4 1826 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 PATE4P0C8F1 98 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 FUT3P21217 361 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 SIGLEC11Q96RL6 698 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
NEK9-201ENST00000238616 CLDN18P56856 261 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 UBE2L3P68036 154 aaKnown RBP11.76□□□□□ -0.53
NEK9-201ENST00000238616 ZNF441Q8N8Z8 693 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 TECRQ9NZ01 308 aaKnown RBP11.76□□□□□ -0.53
NEK9-201ENST00000238616 RSG1Q9BU20 258 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 FCMRO60667 390 aa11.76□□□□□ -0.53
NEK9-201ENST00000238616 ABLIM3O94929 683 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 PPP1R17O96001 155 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 P01737 135 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 PAQR9Q6ZVX9 377 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 C16orf82Q7Z2V1 217 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 SSMEM1Q8WWF3 244 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 ANXA10Q9UJ72 324 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 RAXQ9Y2V3 346 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 TRAV39A0A0B4J263 110 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 UPK1AO00322 258 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 EML2O95834 649 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 KCNJ3P48549 501 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 HERPUD1Q15011 391 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 DUSP18Q8NEJ0 188 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 SHISA4Q96DD7 197 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 TUBA4BQ9H853 241 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 USP54Q70EL1 1684 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 RPLP1P05386 114 aaKnown RBP11.75□□□□□ -0.53
NEK9-201ENST00000238616 SNRPCP09234 159 aaKnown RBP11.75□□□□□ -0.53
NEK9-201ENST00000238616 GABRB1P18505 474 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 RPS4Y1P22090 263 aaKnown RBP11.75□□□□□ -0.53
NEK9-201ENST00000238616 ZBTB44Q8NCP5 570 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 TOLLIPQ9H0E2 274 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 SLC45A2Q9UMX9 530 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 MFSD2BA6NFX1 497 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 TMEM128Q5BJH2 165 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 WDR74Q6RFH5 385 aaPredicted RBP11.75□□□□□ -0.53
NEK9-201ENST00000238616 SPEM1Q8N4L4 309 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 CXXC4Q9H2H0 198 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 ADAMTSL1Q8N6G6 1762 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 KLRB1Q12918 225 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 PRO1933Q9H354 126 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 HSPB8Q9UJY1 196 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 PYCARD-AS1I3L0S3 204 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 NUDT3O95989 172 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 CTSLP07711 333 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 NMUP48645 174 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 AFMIDQ63HM1 303 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 MUC4Q99102 2169 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 IGHV5-51A0A0C4DH38 117 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 C3orf85A0A1B0GTC6 90 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 ZNF32P17041 273 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 AVPR2P30518 371 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 SPRED3Q2MJR0 410 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 LGALSLQ3ZCW2 172 aaPredicted RBP11.75□□□□□ -0.53
NEK9-201ENST00000238616 PABPC1L2AQ5JQF8 200 aa11.75□□□□□ -0.53
NEK9-201ENST00000238616 SLC25A35Q3KQZ1 300 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 GATA6Q92908 595 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 AMDHD2Q9Y303 409 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 DHRS7CA6NNS2 312 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 GFRA1P56159 465 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 MOGAT3Q86VF5 341 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 Q8WTZ3 238 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 MVB12AQ96EY5 273 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 A0A0B4J293 547 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 M0R296 226 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 TMEM241Q24JQ0 296 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 OR10D4PQ8NGN7 298 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 OIT3Q8WWZ8 545 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
NEK9-201ENST00000238616 WNK1Q9H4A3 2382 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 MPDU1O75352 247 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 FAM78BQ5VT40 261 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 NSUN5P2Q63ZY6 315 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 B9D1Q9UPM9 204 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 PF4P02776 101 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 CD96P40200 585 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 ZNF137PP52743 207 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 DPTQ07507 201 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 HLXQ14774 488 aaPredicted RBP11.74□□□□□ -0.53
NEK9-201ENST00000238616 ACER2Q5QJU3 275 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 KIRREL2Q6UWL6 708 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 PP6455Q8WZ26 134 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 FIZ1Q96SL8 496 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 GUK1Q16774 197 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms