RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 PPT1P50897 306 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 MMP15P51511 669 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 DGCR2P98153 550 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 SORDQ00796 357 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 GUCA2AQ02747 115 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 OR8G2PQ6IF36 304 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM122CQ6P4D5 195 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 C6orf201Q7Z4U5 140 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 MDS2Q8NDY4 140 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 BCL2L2Q92843 193 aaPredicted RBP6.93□□□□□ -1.3
NANOG-201ENST00000229307 SCMH1Q96GD3 660 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 MS4A3Q96HJ5 214 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 WNT5BQ9H1J7 359 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 RAB18Q9NP72 206 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 SLC39A9Q9NUM3 307 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 RP1L1Q8IWN7 2480 aaPredicted RBP6.93□□□□□ -1.3
NANOG-201ENST00000229307 A0A1W2PRD5 423 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 A0A1W2PRF3 423 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 A0A1W2PRM7 423 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A10PA6NDY2 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A18PA6NE21 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A16PA6NEW6 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A20PA6NIJ5 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A8PA6NJQ4 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A7PA6NKC0 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A22PA8MWA6 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A12PA8MX19 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A5PA8MXJ8 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A23PA8MXZ1 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A15PP0C7V4 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A13PP0C7W8 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A14PP0C7W9 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 FAM90A24PP0C7X0 464 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 IGSF11Q5DX21 431 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 ELP2Q6IA86 826 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 SAXO1Q8IYX7 474 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 OR10Z1Q8NGY1 313 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 SMIM4Q8WVI0 70 aa6.93□□□□□ -1.3
NANOG-201ENST00000229307 ZNF486Q96H40 463 aaPredicted RBP6.93□□□□□ -1.3
NANOG-201ENST00000229307 NUP210Q8TEM1 1887 aaPredicted RBP6.92□□□□□ -1.3
NANOG-201ENST00000229307 ZFP92A6NM28 416 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 PMELP40967 661 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 IGF2-ASQ6U949 168 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 SLC25A42Q86VD7 318 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 PERPQ96FX8 193 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 CCL13Q99616 98 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 CNTNAP3Q9BZ76 1288 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 ZNF205O95201 554 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 GOSR1O95249 250 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 TTRP02766 147 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 CD3DP04234 171 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 ARL3P36405 182 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 SNTB1Q13884 538 aaKnown RBP6.92□□□□□ -1.3
NANOG-201ENST00000229307 PDCD1Q15116 288 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 C17orf107Q6ZR85 190 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 SUMF2Q8NBJ7 301 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 ASB13Q8WXK3 278 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 DEPPQ9NTK1 212 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 TRBV23-1A0A0A0MS06 115 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 IGHV3-43A0A0B4J1X8 118 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 RPL36A-HNRNPH2H7BZ11 118 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 GAPDHP04406 335 aaKnown RBP6.92□□□□□ -1.3
NANOG-201ENST00000229307 IGHV3-43DP0DP04 118 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 ACKR3P25106 362 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 CCR6P51684 374 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 HLA-DRB3P79483 266 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 DCAF12L2Q5VW00 463 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 OR4A4PQ8NGN8 299 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 NPAP1Q9NZP6 1156 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 NKX2-6A6NCS4 301 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 SMAD7O15105 426 aaKnown RBP6.92□□□□□ -1.3
NANOG-201ENST00000229307 GLI4P10075 376 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 DTYMKP23919 212 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 CA7P43166 264 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 FAM27D1Q5T7N8 215 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 IGFL3Q6UXB1 125 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 ZNF561Q8N587 486 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 ZDHHC22Q8N966 263 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 PXT1Q8NFP0 134 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 APH1BQ8WW43 257 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.92□□□□□ -1.3
NANOG-201ENST00000229307 GAR1Q9NY12 217 aaKnown RBP6.92□□□□□ -1.3
NANOG-201ENST00000229307 SPRR3Q9UBC9 169 aa6.92□□□□□ -1.3
NANOG-201ENST00000229307 CTAG2O75638 210 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 SEMG1P04279 462 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 LIPFP07098 398 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 CECR9P0C854 216 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 MUC1P15941 1255 aaPredicted RBP6.91□□□□□ -1.3
NANOG-201ENST00000229307 IGHV1-2P23083 117 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 LPAR6P43657 344 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 SPANXN5Q5MJ07 72 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 ZNF385CQ66K41 422 aaPredicted RBP6.91□□□□□ -1.3
NANOG-201ENST00000229307 THNSL2Q86YJ6 484 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 MARCH1Q8TCQ1 289 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 C11orf54Q9H0W9 315 aaPredicted RBP6.91□□□□□ -1.3
NANOG-201ENST00000229307 ZFC3H1O60293 1989 aaKnown RBP6.91□□□□□ -1.3
NANOG-201ENST00000229307 LY6G6EA0A0G2JKS1 128 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 MBP02144 154 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 SMIM18P0DKX4 95 aa6.91□□□□□ -1.3
NANOG-201ENST00000229307 FGF12P61328 243 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms