RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 OR8B8Q15620 311 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 KRTAP27-1Q3LI81 207 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 SMUG1Q53HV7 270 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 SPANXN2Q5MJ10 180 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 GLYATL3Q5SZD4 288 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 RPL22L1Q6P5R6 122 aaKnown RBP4.75□□□□□ -1.65
AFP-201ENST00000226359 RBMS3Q6XE24 437 aaKnown RBP4.75□□□□□ -1.65
AFP-201ENST00000226359 COLCA1Q6ZS62 124 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 RHOUQ7L0Q8 258 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 PRSS45Q7RTY3 260 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 C1QL2Q7Z5L3 287 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 MS4A15Q8N5U1 240 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 OR56B2PQ8NGI1 322 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 OTOSQ8NHW6 89 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 NANPQ8TBE9 248 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 RNF133Q8WVZ7 376 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 CAPSLQ8WWF8 208 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 REEP6Q96HR9 211 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 ABHD6Q9BV23 337 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 RTL8AQ9BWD3 113 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 PAPOLGQ9BWT3 736 aaKnown RBP4.75□□□□□ -1.65
AFP-201ENST00000226359 SSBP3Q9BWW4 388 aaPredicted RBP4.75□□□□□ -1.65
AFP-201ENST00000226359 PATZ1Q9HBE1 687 aaKnown RBP4.75□□□□□ -1.65
AFP-201ENST00000226359 PNRC2Q9NPJ4 139 aaKnown RBP4.75□□□□□ -1.65
AFP-201ENST00000226359 RNF7Q9UBF6 113 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 IKZF2Q9UKS7 526 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 PPIAL4AQ9Y536 164 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 CACNG2Q9Y698 323 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 VPS13CQ709C8 3753 aa4.75□□□□□ -1.65
AFP-201ENST00000226359 NSD1Q96L73 2696 aaPredicted RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 ZFHX3Q15911 3703 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 TRAV38-1A0A0B4J264 116 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 PPIAL4CA0A0B4J2A2 164 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 NKX6-3A6NJ46 265 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 ACOD1A6NK06 481 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 NPIPB11E5RHQ5 1161 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 PRYO14603 147 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 NDUFA2O43678 99 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 PLPP2O43688 288 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 KRT8P05787 483 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 SLC2A1P11166 492 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 DUSP1P28562 367 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 CD40LGP29965 261 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 OTX1P32242 354 aaPredicted RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 RPS27P42677 84 aaKnown RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 PITPNBP48739 271 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 RIDAP52758 137 aaKnown RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 ZNF121P58317 390 aaPredicted RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 MRPL28Q13084 256 aaKnown RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 PCK2Q16822 640 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 CDONQ4KMG0 1287 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 LINC01590Q5TEZ4 76 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 CD200R1LQ6Q8B3 271 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 Q6ZR03 302 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 SSX6Q7RTT6 188 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 CEACAM19Q7Z692 300 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 AKAP14Q86UN6 197 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 LRRC28Q86X40 367 aaPredicted RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 YIPF7Q8N8F6 280 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 BOLLQ8N9W6 283 aaKnown RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 OR2AE1Q8NHA4 323 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 SPATA3Q8NHX4 192 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 Q8TCH9 128 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 HAVCR2Q8TDQ0 301 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 ZNRF4Q8WWF5 429 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 CORO2AQ92828 525 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 SLC25A46Q96AG3 418 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 TECTBQ96PL2 329 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 MOB1AQ9H8S9 216 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 MARCH7Q9H992 704 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 UFSP2Q9NUQ7 469 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 COPS3Q9UNS2 423 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 NF1P21359 2839 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 MAP1AP78559 2803 aaPredicted RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 ZNF469Q96JG9 3925 aaPredicted RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 FN1P02751 2386 aaKnown RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 ARFGEF3Q5TH69 2177 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 TLN2Q9Y4G6 2542 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 TRGV11A0A075B6L2 103 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 TRBV2A0A0J9YWF9 115 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 A0A1W2PRV1 198 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 TMEM210A6NLX4 147 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 CEACAM18A8MTB9 384 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 E9PI62 339 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 TRIM77I1YAP6 450 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 LGALS8O00214 317 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 OGG1O15527 345 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 MLNRO43193 412 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 ENSAO43768 121 aaKnown RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 ZNF254O75437 659 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 MTRF1O75570 445 aaKnown RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 FSTL3O95633 263 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 CYB5R3P00387 301 aaPredicted RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 SUMO2P61956 95 aaKnown RBP4.74□□□□□ -1.65
AFP-201ENST00000226359 ACTG1P63261 375 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 ZNF92Q03936 586 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 CDK5R1Q15078 307 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 ZMYND11Q15326 602 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 SNAI3Q3KNW1 292 aa4.74□□□□□ -1.65
AFP-201ENST00000226359 CCDC58Q4VC31 144 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms