RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 FAM46BQ96A09 425 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 FOXRED1Q96CU9 486 aaPredicted RBP11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 ZNF69Q9UC07 566 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 STUB1Q9UNE7 303 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 C2CD3Q4AC94 2353 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 TRBV23-1A0A0A0MS06 115 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 TRAV1-2A0A0B4J238 106 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 SMIM30A4D0T7 59 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 MGST3O14880 152 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 SLC22A1O15245 554 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 VSIG8P0DPA2 414 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 GTF2F2P13984 249 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 JUNBP17275 347 aaPredicted RBP11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 GALP22466 123 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 HTR2CP28335 458 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 FGF9P31371 208 aaPredicted RBP11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 GLIPR1P48060 266 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 CLDN12P56749 244 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 IL13RA2Q14627 380 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 NHLRC3Q5JS37 347 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 METTL11BQ5VVY1 283 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 TCF23Q7RTU1 214 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 VMO1Q7Z5L0 202 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 PDZD9Q8IXQ8 264 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 YIPF6Q96EC8 236 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 COQ2Q96H96 371 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 CHCHD6Q9BRQ6 235 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 KPTNQ9Y664 436 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 DSCAML1Q8TD84 2053 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 CENPVL3A0A0U1RRI6 287 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 ZNF780AO75290 641 aaPredicted RBP11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 CRTAPO75718 401 aaPredicted RBP11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 MGMTP16455 207 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 DLX6P56179 175 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 RIPPLY3P57055 190 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 QRFPP83859 136 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 SRSF2Q01130 221 aaKnown RBP11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 GPR176Q14439 515 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 BRD3OSQ6XYD6 125 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 SUMF2Q8NBJ7 301 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 CHST4Q8NCG5 386 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 LHX4Q969G2 390 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 DMRTB1Q96MA1 342 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 SELENOIQ9C0D9 397 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 PLGRKTQ9HBL7 147 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 SIRT7Q9NRC8 400 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 PCDHB16Q9NRJ7 776 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 NUP50Q9UKX7 468 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 SSR3Q9UNL2 185 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 V9GY05 133 aa11.82□□□□□ -0.52
SUPT4H1-201ENST00000225504 TRAV40A0A0B4J280 105 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 SLC17A2O00624 439 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 OR7C1O76099 320 aaPredicted RBP11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 EPHA1P21709 976 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 KLRD1Q13241 179 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 UNC119Q13432 240 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 ATXN7L3Q14CW9 347 aaPredicted RBP11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 PAN3Q58A45 887 aaKnown RBP11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 HES5Q5TA89 166 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 RUSC1-AS1Q66K80 236 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 SIGIRRQ6IA17 410 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 KIR3DL3Q8N743 410 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 OR6M1Q8NGM8 313 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 PLPPR1Q8TBJ4 325 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 TNFRSF14Q92956 283 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 CENPOQ9BU64 300 aa11.81□□□□□ -0.52
SUPT4H1-201ENST00000225504 LOC100506127A0A0U1RQW1 187 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 A0A1W2PRD5 423 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 A0A1W2PRF3 423 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 A0A1W2PRM7 423 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 RNASEK-C17orf49H0YIS7 233 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 MPIG6BO95866 241 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 CLEC2LP0C7M8 214 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 MYL9P24844 172 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 ERP29P30040 261 aaKnown RBP11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 TGFBR1P36897 503 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 P2RX3P56373 397 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 MEF2CQ06413 473 aaPredicted RBP11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 PLA2G7Q13093 441 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 KIAA2026Q5HYC2 2103 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 ATAD3CQ5T2N8 411 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 HCP5Q6MZN7 132 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 C1orf122Q6ZSJ8 110 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 CMTM4Q8IZR5 234 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 PNKDQ8N490 385 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 OR51D1Q8NGF3 324 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 PPP1R35Q8TAP8 253 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 MRPS24Q96EL2 167 aaKnown RBP11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 Q96M66 194 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 DPCDQ9BVM2 203 aaPredicted RBP11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 IFT22Q9H7X7 185 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 GHRLQ9UBU3 117 aa11.8□□□□□ -0.52
SUPT4H1-201ENST00000225504 A0A0B4J203 849 aa11.79□□□□□ -0.52
SUPT4H1-201ENST00000225504 TRAV39A0A0B4J263 110 aa11.79□□□□□ -0.52
SUPT4H1-201ENST00000225504 TMEM14DPA8MWL7 114 aa11.79□□□□□ -0.52
SUPT4H1-201ENST00000225504 M0R1W7 72 aa11.79□□□□□ -0.52
SUPT4H1-201ENST00000225504 PDCD5O14737 125 aa11.79□□□□□ -0.52
SUPT4H1-201ENST00000225504 UBBP0CG47 229 aa11.79□□□□□ -0.52
SUPT4H1-201ENST00000225504 SLC2A2P11168 524 aaPredicted RBP11.79□□□□□ -0.52
SUPT4H1-201ENST00000225504 RAB3BP20337 219 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms