RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 KLF13Q9Y2Y9 288 aaPredicted RBP11.34□□□□□ -0.59
PLOD3-201ENST00000223127 FBXO7Q9Y3I1 522 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 IFNA17P01571 189 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 CD46P15529 392 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 LMO1P25800 156 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 OR3A2P47893 321 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 SNU13P55769 128 aaKnown RBP11.34□□□□□ -0.59
PLOD3-201ENST00000223127 CLDN18P56856 261 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 KIAA0141Q14154 515 aaPredicted RBP11.34□□□□□ -0.59
PLOD3-201ENST00000223127 ABLIM2Q6H8Q1 611 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 MDS2Q8NDY4 140 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 EMG1Q92979 244 aaKnown RBP11.34□□□□□ -0.59
PLOD3-201ENST00000223127 MARS2Q96GW9 593 aaKnown RBP11.34□□□□□ -0.59
PLOD3-201ENST00000223127 WFDC1Q9HC57 220 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 C19orf12Q9NSK7 152 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 LIPGQ9Y5X9 500 aa11.34□□□□□ -0.59
PLOD3-201ENST00000223127 KLRC4-KLRK1H3BQV0 150 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 SCGB1D2O95969 90 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 RBMXP38159 391 aaKnown RBP11.33□□□□□ -0.6
PLOD3-201ENST00000223127 CAMLGP49069 296 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 PMP22Q01453 160 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 CEACAM16Q2WEN9 425 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 KCNG3Q8TAE7 436 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 MRPL24Q96A35 216 aaKnown RBP11.33□□□□□ -0.6
PLOD3-201ENST00000223127 PRRG4Q9BZD6 226 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 SH3BGRL3Q9H299 93 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 ZNF552Q9H707 407 aaPredicted RBP11.33□□□□□ -0.6
PLOD3-201ENST00000223127 CALHM2Q9HA72 323 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 FRYQ5TBA9 3013 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 KIAA1549Q9HCM3 1950 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 CRTAPO75718 401 aaPredicted RBP11.33□□□□□ -0.6
PLOD3-201ENST00000223127 OR13C7P0DN81 318 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 CD82P27701 267 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 PGAM5Q96HS1 289 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 CHST5Q9GZS9 411 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 LUZP4Q9P127 313 aa11.33□□□□□ -0.6
PLOD3-201ENST00000223127 MED19A0JLT2 244 aaPredicted RBP11.32□□□□□ -0.6
PLOD3-201ENST00000223127 CYTIPO60759 359 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 LY86O95711 162 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 SEC11BP0C7V7 166 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 PPP1CCP36873 323 aaKnown RBP11.32□□□□□ -0.6
PLOD3-201ENST00000223127 TAS2R46P59540 309 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 ZNF766Q5HY98 468 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 GGNBP1Q5YKI7 109 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 RPUSD3Q6P087 351 aaKnown RBP11.32□□□□□ -0.6
PLOD3-201ENST00000223127 ZNF383Q8NA42 475 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 FDCSPQ8NFU4 85 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 HPSE2Q8WWQ2 592 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 LRFN3Q9BTN0 628 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 C14orf166Q9Y224 244 aaKnown RBP11.32□□□□□ -0.6
PLOD3-201ENST00000223127 OR2C1O95371 312 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 CDX1P47902 265 aaPredicted RBP11.32□□□□□ -0.6
PLOD3-201ENST00000223127 RRADP55042 308 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 PRSS12P56730 875 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 RAB1AP62820 205 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 GRB2P62993 217 aaKnown RBP11.32□□□□□ -0.6
PLOD3-201ENST00000223127 MRPS34P82930 218 aaKnown RBP11.32□□□□□ -0.6
PLOD3-201ENST00000223127 DEFA6Q01524 100 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 RNFT1Q5M7Z0 435 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 HIST2H3AQ71DI3 136 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 TUSC5Q8IXB3 177 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 SLC35B3Q9H1N7 401 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 OPA3Q9H6K4 179 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 KCNJ16Q9NPI9 418 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 FREM1Q5H8C1 2179 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 SPENQ96T58 3664 aaKnown RBP11.32□□□□□ -0.6
PLOD3-201ENST00000223127 MRPL33O75394 65 aaKnown RBP11.32□□□□□ -0.6
PLOD3-201ENST00000223127 FOSL1P15407 271 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 ZNF133P52736 654 aaPredicted RBP11.32□□□□□ -0.6
PLOD3-201ENST00000223127 CLINT1Q14677 625 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 SLC10A1Q14973 349 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 TSPO2Q5TGU0 170 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 FAM27BQ5VT28 67 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 ZNF774Q6NX45 483 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 SLAMF9Q96A28 289 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 MUCL1Q96DR8 90 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 TMEM38BQ9NVV0 291 aa11.32□□□□□ -0.6
PLOD3-201ENST00000223127 A0A1B0GV50 99 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 GPR37O15354 613 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 ZNHIT1O43257 154 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 SYNGR4O95473 234 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 HCKP08631 526 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 CHATP28329 748 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 RPS10P46783 165 aaKnown RBP11.31□□□□□ -0.6
PLOD3-201ENST00000223127 SURF2Q15527 256 aaPredicted RBP11.31□□□□□ -0.6
PLOD3-201ENST00000223127 RSPO1Q2MKA7 263 aaPredicted RBP11.31□□□□□ -0.6
PLOD3-201ENST00000223127 NPRL2Q8WTW4 380 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 RHOVQ96L33 236 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 FOXB1Q99853 325 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 MOB1AQ9H8S9 216 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 PLEKHA2Q9HB19 425 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 MMP24Q9Y5R2 645 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 DCHS1Q96JQ0 3298 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 IGKV1D-8A0A087WSZ0 117 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 FOXI3A8MTJ6 420 aaPredicted RBP11.31□□□□□ -0.6
PLOD3-201ENST00000223127 M0R135 149 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 ZNF32P17041 273 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 P2RY1P47900 373 aa11.31□□□□□ -0.6
PLOD3-201ENST00000223127 SSTP61278 116 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms