RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 NEDD4LQ96PU5 975 aa22.65■■□□□ 1.22
CHMP4B-201ENST00000217402 DPCDQ9BVM2 203 aaPredicted RBP22.65■■□□□ 1.22
CHMP4B-201ENST00000217402 SLC25A10Q9UBX3 287 aaPredicted RBP22.65■■□□□ 1.22
CHMP4B-201ENST00000217402 PEX16Q9Y5Y5 336 aa22.65■■□□□ 1.22
CHMP4B-201ENST00000217402 CTDSP2O14595 271 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 PDCD6O75340 191 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 TK1P04183 234 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 OR3A1P47881 315 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 FAM189A2Q15884 450 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 LRRC10Q5BKY1 277 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 ZNF841Q6ZN19 808 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 OR4S1Q8NGB4 309 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 NEK7Q8TDX7 302 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 SPACA1Q9HBV2 294 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 RCC2Q9P258 522 aaKnown RBP22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 CLN8Q9UBY8 286 aa22.64■■□□□ 1.22
CHMP4B-201ENST00000217402 A0A075B6Q4 140 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 K7N7A8 449 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 HEXAP06865 529 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 NDUFB7P17568 137 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 FUT3P21217 361 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 CHATP28329 748 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 ATXN7L3Q14CW9 347 aaPredicted RBP22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 GRK1Q15835 563 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 ESCO2Q56NI9 601 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 C6orf201Q7Z4U5 140 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 LAX1Q8IWV1 398 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 DTX3Q8N9I9 347 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 PHF21AQ96BD5 680 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 POM121Q96HA1 1249 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 SNX22Q96L94 193 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 NXF2Q9GZY0 626 aaKnown RBP22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 SHARPINQ9H0F6 387 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 ING3Q9NXR8 418 aa22.64■■□□□ 1.21
CHMP4B-201ENST00000217402 FOXI3A8MTJ6 420 aaPredicted RBP22.63■■□□□ 1.21
CHMP4B-201ENST00000217402 RAB27BO00194 218 aa22.63■■□□□ 1.21
CHMP4B-201ENST00000217402 PHF1O43189 567 aaPredicted RBP22.63■■□□□ 1.21
CHMP4B-201ENST00000217402 GNB2P62879 340 aa22.63■■□□□ 1.21
CHMP4B-201ENST00000217402 LOXL1Q08397 574 aaPredicted RBP22.63■■□□□ 1.21
CHMP4B-201ENST00000217402 OR8H2Q8N162 312 aa22.63■■□□□ 1.21
CHMP4B-201ENST00000217402 OR10R2Q8NGX6 335 aa22.63■■□□□ 1.21
CHMP4B-201ENST00000217402 SSBP3Q9BWW4 388 aaPredicted RBP22.63■■□□□ 1.21
CHMP4B-201ENST00000217402 ABCG5Q9H222 651 aa22.63■■□□□ 1.21
CHMP4B-201ENST00000217402 ITPR3Q14573 2671 aa22.63■■□□□ 1.21
CHMP4B-201ENST00000217402 ELK1P19419 428 aa22.62■■□□□ 1.21
CHMP4B-201ENST00000217402 EDDM3AQ14507 147 aa22.62■■□□□ 1.21
CHMP4B-201ENST00000217402 WDR25Q64LD2 544 aaPredicted RBP22.62■■□□□ 1.21
CHMP4B-201ENST00000217402 RAB3CQ96E17 227 aa22.62■■□□□ 1.21
CHMP4B-201ENST00000217402 ARHGAP5-AS1Q96IT6 56 aa22.62■■□□□ 1.21
CHMP4B-201ENST00000217402 FAM234AQ9H0X4 552 aa22.62■■□□□ 1.21
CHMP4B-201ENST00000217402 PLEKHJ1Q9NW61 149 aa22.62■■□□□ 1.21
CHMP4B-201ENST00000217402 FAM25AB3EWG3 89 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 FAM25CB3EWG5 89 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 FAM25GB3EWG6 89 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 FAM157AC9JC47 383 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 H7C1Q1 480 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 APOA1P02647 267 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 TMEM50BP56557 158 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 PLAC9Q5JTB6 97 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 CIARTQ8N365 385 aaPredicted RBP22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 PPP1R35Q8TAP8 253 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 RAB40AQ8WXH6 277 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 DYRK2Q92630 601 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 S100A16Q96FQ6 103 aaKnown RBP22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 MIXL1Q9H2W2 232 aa22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 ZMAT3Q9HA38 289 aaKnown RBP22.61■■□□□ 1.21
CHMP4B-201ENST00000217402 UBE2QL1A1L167 161 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 MCRIP1C9JLW8 97 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 CDK2P24941 298 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 Q6ZTK2 550 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 IZUMO1Q8IYV9 350 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 H1FXQ92522 213 aaKnown RBP22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 SULT4A1Q9BR01 284 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 FAAP24Q9BTP7 215 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 MMP27Q9H306 513 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 LPAR2Q9HBW0 351 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 H3BUI4 141 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 SMAD7O15105 426 aaKnown RBP22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 EDDM3BP56851 147 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 MADCAM1Q13477 382 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 GDPD3Q7L5L3 318 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 TPRX1Q8N7U7 411 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 CMTM3Q96MX0 182 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 PECRQ9BY49 303 aa22.6■■□□□ 1.21
CHMP4B-201ENST00000217402 OTOGQ6ZRI0 2925 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 MGST3O14880 152 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 SCGNO76038 276 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 GNB3P16520 340 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 NPY4RP50391 375 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 LCN2P80188 198 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 AESQ08117 197 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 OR4M1Q8NGD0 313 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 OR5D13Q8NGL4 314 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 PLPPR1Q8TBJ4 325 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 DIABLOQ9NR28 239 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 TEX15Q9BXT5 2789 aa22.59■■□□□ 1.21
CHMP4B-201ENST00000217402 ZFP36P26651 326 aaKnown RBP22.58■■□□□ 1.21
CHMP4B-201ENST00000217402 RBM39Q14498 530 aaKnown RBP22.58■■□□□ 1.21
CHMP4B-201ENST00000217402 OLFML2AQ68BL7 652 aa22.58■■□□□ 1.21
CHMP4B-201ENST00000217402 ETAA1Q9NY74 926 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms