RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 LOC105371242A0A075B767 164 aa16.76■□□□□ 0.27
RHBDD3-201ENST00000216085 TRBV23-1A0A0A0MS06 115 aa16.76■□□□□ 0.27
RHBDD3-201ENST00000216085 METTL21EPA6NDL7 271 aa16.76■□□□□ 0.27
RHBDD3-201ENST00000216085 SLC33A1O00400 549 aaPredicted RBP16.76■□□□□ 0.27
RHBDD3-201ENST00000216085 MGST3O14880 152 aa16.76■□□□□ 0.27
RHBDD3-201ENST00000216085 TGFAP01135 160 aa16.76■□□□□ 0.27
RHBDD3-201ENST00000216085 RBM39Q14498 530 aaKnown RBP16.76■□□□□ 0.27
RHBDD3-201ENST00000216085 BTNL3Q6UXE8 466 aa16.76■□□□□ 0.27
RHBDD3-201ENST00000216085 NEDD4LQ96PU5 975 aa16.76■□□□□ 0.27
RHBDD3-201ENST00000216085 POLR3KQ9Y2Y1 108 aaPredicted RBP16.76■□□□□ 0.27
RHBDD3-201ENST00000216085 H3BMQ9 156 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 ZNF701M0R085 212 aaPredicted RBP16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 ENSAO43768 121 aaKnown RBP16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 ZNF16P17020 682 aaPredicted RBP16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 GATA3P23771 443 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 BTN2A1Q7KYR7 527 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 BIVMQ86UB2 503 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 OR56B1Q8NGI3 324 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 LGALS14Q8TCE9 139 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 NEK7Q8TDX7 302 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 TMEM186Q96B77 213 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 CHST6Q9GZX3 395 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 PPA2Q9H2U2 334 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 LPAR3Q9UBY5 353 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 MALRD1Q5VYJ5 2156 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.75■□□□□ 0.275e-7■■■□□ 18.1
RHBDD3-201ENST00000216085 MED13LQ71F56 2210 aa16.75■□□□□ 0.27
RHBDD3-201ENST00000216085 ZANQ9Y493 2812 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 HIVEP1P15822 2718 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 A0A0B4J203 849 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 PPIAL4CA0A0B4J2A2 164 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 KIAA1324LA8MWY0 1029 aaPredicted RBP16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 LDLRAD4O15165 306 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 SCGNO76038 276 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 CSN2P05814 226 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 DVL1P1P54792 670 aaPredicted RBP16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 PDCD1Q15116 288 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 C17orf107Q6ZR85 190 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 ACOT12Q8WYK0 555 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 DPCDQ9BVM2 203 aaPredicted RBP16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 A0A0G2JMP0 313 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 A0A0X1KG70 313 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 A0A1W2PPH5 198 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 TMEM82A0PJX8 343 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 MCRIP1C9JLW8 97 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 HSPB6O14558 160 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 CD5LO43866 347 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 PSPNO60542 156 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 LIPFP07098 398 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 SNRPBP14678 240 aaKnown RBP16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 FUT3P21217 361 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 ZFP36P26651 326 aaKnown RBP16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 OR3A1P47881 315 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 EDDM3BP56851 147 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 EDDM3AQ14507 147 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 SPCS2Q15005 226 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 RAB12Q6IQ22 244 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 SUMF2Q8NBJ7 301 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 OR4M2Q8NGB6 313 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 PHF21AQ96BD5 680 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 BARHL1Q9BZE3 327 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 LPAR5Q9H1C0 372 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 HIF1ANQ9NWT6 349 aa16.74■□□□□ 0.27
RHBDD3-201ENST00000216085 TRAV24A0A0B4J272 114 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 A0A1W2PQ09 198 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 PDCD6O75340 191 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 GLAP06280 429 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 NKAPLQ5M9Q1 402 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 DCAF12L2Q5VW00 463 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 OR4S1Q8NGB4 309 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 RAB40AQ8WXH6 277 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 DMRTB1Q96MA1 342 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 DCTN5Q9BTE1 182 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 SHARPINQ9H0F6 387 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 RCC2Q9P258 522 aaKnown RBP16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 RPUSD1Q9UJJ7 312 aaKnown RBP16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 KCNS2Q9ULS6 477 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 SPATA2Q9UM82 520 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 PEX16Q9Y5Y5 336 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 DOCK11Q5JSL3 2073 aa16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 ZNF469Q96JG9 3925 aaPredicted RBP16.73■□□□□ 0.27
RHBDD3-201ENST00000216085 ABCA2Q9BZC7 2435 aa16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 PAHP00439 452 aa16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 ZNF182P17025 639 aaPredicted RBP16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 BLVRBP30043 206 aaPredicted RBP16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 RPL31P62899 125 aaKnown RBP16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 DYNC1I2Q13409 638 aaKnown RBP16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 MZT2AQ6P582 158 aa16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 NUDT16L1Q9BRJ7 211 aaKnown RBP16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 RBM38Q9H0Z9 239 aaKnown RBP16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 ABCA1O95477 2261 aa16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 IGHV2-70DA0A0C4DH43 119 aa16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 ERP29P30040 261 aaKnown RBP16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 VEGFCP49767 419 aa16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 ATXN7L3Q14CW9 347 aaPredicted RBP16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 FAM185AQ8N0U4 392 aa16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 NICN1Q9BSH3 213 aa16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 ATG5Q9H1Y0 275 aa16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 PLEKHJ1Q9NW61 149 aa16.72■□□□□ 0.27
RHBDD3-201ENST00000216085 F8P00451 2351 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms