RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Gm21797J3QNW5 180 aa9.4□□□□□ -0.9
Scn9a-201ENSMUST00000100063 Rab18P35293 206 aa9.4□□□□□ -0.9
Scn9a-201ENSMUST00000100063 CcsapQ8QZT2 252 aa9.4□□□□□ -0.9
Scn9a-201ENSMUST00000100063 Tm7sf3Q9CRG1 565 aa9.4□□□□□ -0.9
Scn9a-201ENSMUST00000100063 NubplQ9CWD8 319 aa9.4□□□□□ -0.9
Scn9a-201ENSMUST00000100063 Gnpnat1Q9JK38 184 aa9.4□□□□□ -0.9
Scn9a-201ENSMUST00000100063 Olfr154Q9QY00 318 aa9.4□□□□□ -0.9
Scn9a-201ENSMUST00000100063 Vma21-psA0A140T8R2 101 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Btbd8D3YUB6 377 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Cd9P40240 226 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 CamlgP49070 294 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 ShbgP97497 403 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Vmn1r5B2RQT2 315 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Ccdc188F6WEU2 249 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Ascl5M0QWB7 188 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Wsb2O54929 404 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Creg1O88668 220 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Nudt10P0C027 164 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Nudt11P0C028 164 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 KhsrpQ3U0V1 748 aaKnown RBP9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Kirrel2Q7TSU7 700 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Gpr137Q80ZU9 396 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Sec22aQ8BH47 307 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 LssQ8BLN5 733 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Rbm14Q8C2Q3 669 aaKnown RBP9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Vmn1r81Q8R286 306 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Hspb2Q99PR8 182 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Tmem269Q9D4Y8 254 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Mmp1bQ9EPL6 463 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Rgs21V9GXQ3 152 aa9.4□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Zfp345A2AQA1 561 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Spats1A2RRY8 269 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Pwwp2bE9Q9M8 600 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Q3U595 105 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Znf629Q6A085 867 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 ManealQ6P1J0 452 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr1371Q7TQT7 311 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Lgi3Q8K406 548 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Nsun5Q8K4F6 465 aaKnown RBP9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Etfrf1Q91V16 86 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Raf1Q99N57 648 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Abca1P41233 2261 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Als2Q920R0 1651 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Cldn34aG3UW52 211 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Irs1P35569 1233 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 St3gal2Q11204 350 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Gm11492Q5ND19 536 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Tas2r116Q7M713 305 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr107Q7TRK4 309 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 C2cd4bQ80XU5 340 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Neurl3Q8CJC5 254 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr447Q8VGP6 310 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Cacna1gQ5SUF7 2381 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Dock6Q8VDR9 2080 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Dock10Q8BZN6 2150 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 RaxO35602 342 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Gng3P63216 75 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 SrmQ64674 302 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Slc49a3Q8CE47 516 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Scamp2Q9ERN0 329 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Slco1b2Q9JJL3 689 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr571E9Q407 322 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Vmn1r121K7N6J4 314 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Col9a2Q07643 688 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 SelplgQ62170 397 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr884Q7TRE1 309 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Osr2Q91ZD1 312 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 EomesO54839 707 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 C1qbP14106 253 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Lcn4Q62472 185 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Clec2hQ8C1T8 218 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Mr1Q8HWB0 341 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Zbtb25G3UW50 439 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Phxr2P15972 65 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Dbx1P52950 335 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Adam26bQ6IMH6 699 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Ccsmst1Q6RUT7 136 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr1014Q7TR95 305 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr1013Q7TR96 305 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr358Q7TRY5 330 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Vstm2aQ8R0A6 236 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 MeiobQ9D513 470 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Med29Q9DB91 199 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr887Q9EQA6 309 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Meox2P32443 303 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Foxc2Q61850 494 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Foxb1Q64732 325 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 MffQ6PCP5 291 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr1271Q8VG62 305 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Olfr531Q8VGL2 304 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Rab5aQ9CQD1 215 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Ufc1Q9CR09 167 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Acer3Q9D099 267 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Ppp1r27Q9D119 154 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Ak3Q9WTP7 227 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Sipa1l1Q8C0T5 1782 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Prr23a1G3UW32 258 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Gm21788J3QNH3 180 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 Sstr5O08858 362 aa9.39□□□□□ -0.91
Scn9a-201ENSMUST00000100063 P01807 119 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms