RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Olfr418A0A140T8J6 310 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 FhitO89106 150 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 P01735 133 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Vmn1r4Q8R2D3 297 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr308Q8VFP2 308 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 1700069L16RikQ9D9H5 109 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 RangrfQ9JIB0 185 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Platr25A0A1Y7VIZ1 466 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp944E9PUS4 492 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gpm6aP35802 278 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fbxl2Q8BH16 423 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Znf784Q8BI69 297 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Hsd17b6Q9R092 317 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 FocadA2AKG8 1798 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Cabin1G3X8Q1 2187 aaKnown RBP10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Znf296E9Q6W4 445 aaKnown RBP10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 NumblO08919 604 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 CtslP06797 334 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 BsgP18572 389 aaKnown RBP10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Id1P20067 168 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Cdadc1Q8BMD5 523 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Uqcc3Q8K2T4 89 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1233Q8VGN0 305 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Kcnj3P63250 501 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fam117bQ3U3E2 584 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Prss53Q571E5 552 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Kirrel2Q7TSU7 700 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tmem106cQ80VP8 260 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nt5mQ8VCE6 220 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Rfpl4aQ8VH31 287 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nkain1Q9D035 207 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 9230110F15RikQ9D262 117 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Plxnb2B2RXS4 1842 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm35060A0A140LIV7 231 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1293-psA0A1L1SVB5 326 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm15292L7N231 93 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Lyz1P17897 148 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Trhr2Q9ERT2 382 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 GrprP21729 384 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Efna1P52793 205 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Hist1h3aP68433 136 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nhlh1Q02576 133 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fxyd2Q04646 70 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Mfsd12Q3U481 476 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp772Q3UQL6 416 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nhlh2Q64221 135 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp947Q8BIQ6 437 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Rps21Q9CQR2 83 aaKnown RBP10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 HypmQ9CR04 117 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr585E9PXW4 318 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 C5ar1P30993 351 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Q9CX63 252 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 PatjQ63ZW7 1834 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Mep1aP28825 747 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tcl1aP56280 116 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Slc17a4Q5NCM1 492 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fxyd3Q61835 88 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Kctd12Q6WVG3 327 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Rell2Q8BRJ3 303 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nudcd2Q9CQ48 157 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Dtwd2Q9D0U1 298 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 TrilQ9DBY4 809 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Sdc1P18828 311 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Casp3P70677 277 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tex261Q62302 196 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Il22ra1Q80XZ4 581 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Vmn1r202Q8R259 302 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1184Q8VG86 311 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1262Q8VGN2 304 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ms4a18J3QN01 344 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 HgdO09173 445 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Myadml2Q08AU7 307 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Samd12Q0VE29 161 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 CtrcQ3SYP2 268 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Mbd3l2Q3UXB0 228 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1512Q8VF72 313 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1408Q8VG32 310 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Vsig2Q9Z109 328 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm10112D3YWP5 117 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Klk1b5P15945 261 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nkx2-6P43688 289 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fabp6P51162 128 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fabp7P51880 132 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Clec12bQ149M0 275 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Slc34a1Q60825 637 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 DbhQ64237 622 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Slc36a4Q8CH36 500 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Sgo1Q9CXH7 517 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fbxw27A0A1D5RLF0 466 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Calhm1D3Z291 348 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr554E9Q546 317 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp108E9Q8I5 642 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Lsm2O35900 95 aaKnown RBP10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Itgb7P26011 806 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Klf1P46099 358 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Pip5k1aP70182 546 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Rtp3Q5QGU6 474 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Slc25a40Q8BGP6 337 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr137Q8VFC2 312 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr837Q8VFJ4 312 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms