RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Pla2g16Q8R3U1 162 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 RhebQ921J2 184 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Tmem50bQ9D1X9 158 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr951Q9EQ94 314 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr948Q9EQ95 321 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr957Q9EQB7 311 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gm12117V9GXK0 151 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr785A0A0N4SVC3 312 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ccdc9bA3KGF9 545 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr424E9Q0Q2 315 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Mdh2P08249 338 aaKnown RBP13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 P10404 641 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Irf2P23906 349 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Rab19P35294 217 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Pax9P47242 342 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 NcanP55066 1268 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Lsm5P62322 91 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Slc17a1Q61983 465 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 AstlQ6HA09 435 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 2210407C18RikQ6YI28 220 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr527Q7TRT9 305 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ntng2Q8R4F1 589 aaKnown RBP13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr788Q8VFI0 311 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr1451Q8VFX5 310 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr472Q8VG43 310 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr559Q8VH14 318 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Pno1Q9CPS7 248 aaKnown RBP13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Chchd2Q9D1L0 153 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Zdhhc4Q9D6H5 343 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Rhebl1Q9D8T3 184 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Fn3kQ9ER35 309 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Riox1Q9JJF3 603 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Parp4E9PYK3 1969 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gm4131A0A140LJ24 318 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ankdd1aA0A1L1ST07 508 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ighg2cF6TQW2 404 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Wisp1O54775 367 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ccl22O88430 92 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 P01864 335 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 GbaP17439 515 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Apoc1P34928 88 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Defb41Q30KP6 65 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Isg20l2Q3U1G5 368 aaKnown RBP13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Zfp235Q499D5 702 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gm527Q4KL13 310 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Sult1c1Q80VR3 304 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Klhl24Q8BRG6 600 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 DutQ8VCG1 200 aaKnown RBP13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Q8WUR0 141 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Defb8Q91V82 60 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 LsrQ99KG5 594 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Q9D4G1 230 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Lysmd2Q9D7V2 215 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Q9D9C7 252 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Barx1Q9ER42 254 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 GmfgQ9ERL7 142 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Cx3cr1Q9Z0D9 354 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gm42715A0A087WP63 3095 aaKnown RBP13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 MpdzQ8VBX6 2055 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gm28870A0A0A6YW38 222 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 AsmtD3KU66 387 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 EomesO54839 707 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Igh-1aP01865 398 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Slc25a33Q3TZX3 320 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Csnk2a1Q60737 391 aaKnown RBP13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ptpmt1Q66GT5 193 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Heatr6Q6P1G0 1184 aaKnown RBP13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Slc35e3Q6PGC7 313 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr1133Q7TR44 313 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Cdadc1Q8BMD5 523 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Mr1Q8HWB0 341 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Med25Q8VCB2 745 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr994Q8VF73 314 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Il36bQ9D6Z6 183 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Alkbh4Q9D8F1 300 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Znf593Q9DB42 134 aaKnown RBP13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ergic1Q9DC16 290 aaKnown RBP13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 NagkQ9QZ08 343 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Dkkl1Q9QZL9 230 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 RbmxQ9WV02 391 aaKnown RBP13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Cldn15Q9Z0S5 227 aa13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Klf5Q9Z0Z7 446 aaKnown RBP13.1□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Vmn1r175K7N6T9 304 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Hoxa5P09021 270 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Defa11P50709 85 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gramd2aQ3V3G7 320 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 C1ql4Q4ZJM9 238 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Utf1Q6J1H4 339 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 JkampQ8BI36 311 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Synpo2lQ8BWB1 975 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Pias2Q8C5D8 621 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Lin28aQ8K3Y3 209 aaKnown RBP13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Vmn1r36Q8R2E3 305 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr802Q8VGJ2 312 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Prss42Q8VIF2 335 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Acy3Q91XE4 318 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Papd4Q91YI6 484 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Tmem100Q9CQG9 134 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Snu13Q9D0T1 128 aaKnown RBP13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Kdf1A2A9F4 397 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms