RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 OR5B21A6NL26 309 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 FAM90A27PA6NNH2 459 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 IQCF6A8MYZ5 107 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 TRAPPC2LH3BP13 241 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 DUS4LO95620 317 aaKnown RBP7.57□□□□□ -1.2
PHGDH-219ENST00000641513 HIST1H1DP16402 221 aaKnown RBP7.57□□□□□ -1.2
PHGDH-219ENST00000641513 ZP3P21754 424 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 CD34P28906 385 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 SSTR2P30874 369 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 SNU13P55769 128 aaKnown RBP7.57□□□□□ -1.2
PHGDH-219ENST00000641513 GNG3P63215 75 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 SURF2Q15527 256 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-219ENST00000641513 AANATQ16613 207 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 ALKBH6Q3KRA9 238 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 NKAPLQ5M9Q1 402 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 SIGIRRQ6IA17 410 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 C11orf88Q6PI97 169 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 HAGHLQ6PII5 290 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-219ENST00000641513 OVCH2Q7RTZ1 564 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 HSD17B13Q7Z5P4 300 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-219ENST00000641513 HOGA1Q86XE5 327 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 CALHM1Q8IU99 346 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 MKXQ8IYA7 352 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 KCNRGQ8N5I3 272 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 PXT1Q8NFP0 134 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 OR52B4Q8NGK2 314 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 NUDCD2Q8WVJ2 157 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 HPSE2Q8WWQ2 592 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 OR5P3Q8WZ94 311 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 MARS2Q96GW9 593 aaKnown RBP7.57□□□□□ -1.2
PHGDH-219ENST00000641513 ARHGAP5-AS1Q96IT6 56 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 PHB2Q99623 299 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 SLC6A7Q99884 636 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 TM2D1Q9BX74 207 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 CHIAQ9BZP6 476 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 TINAGL1Q9GZM7 467 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-219ENST00000641513 SLC25A32Q9H2D1 315 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 TMEM100Q9NV29 134 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 COQ3Q9NZJ6 369 aa7.57□□□□□ -1.2
PHGDH-219ENST00000641513 PURGQ9UJV8 347 aaKnown RBP7.57□□□□□ -1.2
PHGDH-219ENST00000641513 NOP16Q9Y3C1 178 aaKnown RBP7.57□□□□□ -1.2
PHGDH-219ENST00000641513 HCFC1P51610 2035 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 TRBV6-7A0A0A0MS04 114 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 IGKV1-12A0A0C4DH73 117 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 MFSD2BA6NFX1 497 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 WIPF3A6NGB9 483 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 DBX1A6NMT0 343 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 FOXI3A8MTJ6 420 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-219ENST00000641513 SERPINE3A8MV23 424 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 KRBOX1C9JBD0 128 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 ATP6V1G2-DDX39BF2Z307 99 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 MFNGO00587 321 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 CFDP00746 253 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-219ENST00000641513 IGKV1D-12P01611 117 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 GRPP07492 148 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 NMBP08949 121 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 BCL3P20749 454 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 TUBG1P23258 451 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 CCKARP32238 428 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 ASCL1P50553 236 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 TAS2R46P59540 309 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 CYCSP99999 105 aaKnown RBP7.56□□□□□ -1.2
PHGDH-219ENST00000641513 IGFBP7Q16270 282 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 TAF9Q16594 264 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 C3orf36Q3SXR2 165 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 DCAF12L2Q5VW00 463 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 PEG10Q86TG7 708 aaKnown RBP7.56□□□□□ -1.2
PHGDH-219ENST00000641513 RTN4RL2Q86UN3 420 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 ZNF573Q86YE8 665 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 C1orf174Q8IYL3 243 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 FBXL14Q8N1E6 418 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 OSR2Q8N2R0 312 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 ZSCAN4Q8NAM6 433 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-219ENST00000641513 TMEM185AQ8NFB2 350 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 LRRC20Q8TCA0 184 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 RBPMSQ93062 196 aaKnown RBP7.56□□□□□ -1.2
PHGDH-219ENST00000641513 FBXW5Q969U6 566 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 USB1Q9BQ65 265 aaKnown RBP7.56□□□□□ -1.2
PHGDH-219ENST00000641513 FGF23Q9GZV9 251 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-219ENST00000641513 MFFQ9GZY8 342 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 ARL6Q9H0F7 186 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 TUBG2Q9NRH3 451 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 PLEKHJ1Q9NW61 149 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 COMMD9Q9P000 198 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 JKAMPQ9P055 326 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 GLS2Q9UI32 602 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 DUSP13Q9UII6 198 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 TNFSF18Q9UNG2 199 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 LAMA5O15230 3695 aa7.56□□□□□ -1.2
PHGDH-219ENST00000641513 ACACBO00763 2458 aa7.55□□□□□ -1.2
PHGDH-219ENST00000641513 RP1L1Q8IWN7 2480 aaPredicted RBP7.55□□□□□ -1.2
PHGDH-219ENST00000641513 FXYD6-FXYD2A0A087WZ82 144 aa7.55□□□□□ -1.2
PHGDH-219ENST00000641513 TRAV14DV4A0A0A6YYC5 116 aa7.55□□□□□ -1.2
PHGDH-219ENST00000641513 IGHV3-64DA0A0J9YX35 117 aa7.55□□□□□ -1.2
PHGDH-219ENST00000641513 C9orf170A2RU37 121 aa7.55□□□□□ -1.2
PHGDH-219ENST00000641513 A8MXK9 166 aa7.55□□□□□ -1.2
PHGDH-219ENST00000641513 H0YL77 283 aa7.55□□□□□ -1.2
PHGDH-219ENST00000641513 M0QYG6 137 aa7.55□□□□□ -1.2
PHGDH-219ENST00000641513 BET1O15155 118 aa7.55□□□□□ -1.2
PHGDH-219ENST00000641513 ARPC5O15511 151 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms