RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 RAC1P63000 192 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 HNF4GQ14541 408 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 NSUN5P2Q63ZY6 315 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 RARRES2Q99969 163 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 SYT3Q9BQG1 590 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 BCO1Q9HAY6 547 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 EXPH5Q8NEV8 1989 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 NKX2-6A6NCS4 301 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 HSD17B6O14756 317 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 SUCLG1P53597 346 aaKnown RBP12.64□□□□□ -0.39
SCARB2-221ENST00000640341 MRPS34P82930 218 aaKnown RBP12.64□□□□□ -0.39
SCARB2-221ENST00000640341 RAB35Q15286 201 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 LGI3Q8N145 548 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 PRR18Q8N4B5 295 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 NAT6Q93015 286 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 BCL2L14Q9BZR8 327 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 SMOC1Q9H4F8 434 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 C19orf12Q9NSK7 152 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 SIT1Q9Y3P8 196 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 A0A1W2PPE3 182 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 TXNL1O43396 289 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 SYNGR3O43761 229 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 IGLV3-1P01715 115 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 GDF1P27539 372 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 GNRHRP30968 328 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 ALDH3B1P43353 468 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 MEOX2P50222 304 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 RTL6Q6ICC9 239 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 LIAT1Q6ZQX7 453 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 VASH2Q86V25 355 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 ZNF695Q8IW36 515 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 OR10D3Q8NH80 312 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 UBALD1Q8TB05 177 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 PLEKHA2Q9HB19 425 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 FOXD3Q9UJU5 478 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-221ENST00000640341 URGCP-MRPS24S4R325 110 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 CBR3O75828 277 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 KLF7O75840 302 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-221ENST00000640341 DKK1O94907 266 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 H2AFB1P0C5Y9 115 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 OTX1P32242 354 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-221ENST00000640341 EIF2S3LQ2VIR3 472 aaKnown RBP12.63□□□□□ -0.39
SCARB2-221ENST00000640341 ANGPTL4Q9BY76 406 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 TMEM38BQ9NVV0 291 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 TUBD1Q9UJT1 453 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 ESPL1Q14674 2120 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 K7ESF4 209 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 SNCAP37840 140 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 HAAOP46952 286 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 HABP2Q14520 560 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-221ENST00000640341 TSC22D1Q15714 1073 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 HAGHQ16775 308 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 SKA3Q8IX90 412 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 ZNF565Q8N9K5 539 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 HIST1H2BAQ96A08 127 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 HS3ST6Q96QI5 342 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 KPTNQ9Y664 436 aa12.63□□□□□ -0.39
SCARB2-221ENST00000640341 COL5A1P20908 1838 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-221ENST00000640341 GPM6AP51674 278 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 IGFBP7Q16270 282 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 UBAC2Q8NBM4 344 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 SLC7A10Q9NS82 523 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 ZDHHC8Q9ULC8 765 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 LOC102725191A0A1B0GVB3 256 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 RD3LP0DJH9 198 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 PTAFRP25105 342 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 ECI1P42126 302 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 FAM3AP98173 230 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 RUNX1Q01196 453 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 CXorf66Q5JRM2 361 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-221ENST00000640341 LHFPL2Q6ZUX7 228 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 AGBL5Q8NDL9 886 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 OR2G3Q8NGZ4 309 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 MAFAQ8NHW3 353 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-221ENST00000640341 A0A087WZY1 265 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 LINC01387J3KSC0 135 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 PPYP01298 95 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 HLA-HP01893 362 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 S100A9P06702 114 aaKnown RBP12.62□□□□□ -0.39
SCARB2-221ENST00000640341 NQO2P16083 231 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 CRYGSP22914 178 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 FOLR3P41439 243 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 RAC3P60763 192 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 IZUMO4Q1ZYL8 232 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 IMMP1LQ96LU5 166 aa12.62□□□□□ -0.39
SCARB2-221ENST00000640341 CEP192Q8TEP8 1941 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 GPR137BO60478 399 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 PDCD6O75340 191 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 FBP1P09467 338 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 SCTP09683 121 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 FKBP2P26885 142 aaKnown RBP12.61□□□□□ -0.39
SCARB2-221ENST00000640341 VAMP2P63027 116 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 FABP9Q0Z7S8 132 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 OR56B2PQ8NGI1 322 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 RNASE11Q8TAA1 199 aaKnown RBP12.61□□□□□ -0.39
SCARB2-221ENST00000640341 IL1F10Q8WWZ1 152 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 COA4Q9NYJ1 87 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 TIMM10BQ9Y5J6 103 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 TRAV39A0A0B4J263 110 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 C3orf85A0A1B0GTC6 90 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms