RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 GLS2Q9UI32 602 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 HIVEP1P15822 2718 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 FLNAP21333 2647 aaKnown RBP10.92□□□□□ -0.66
GTF3A-209ENST00000640289 IGHV2-70DA0A0C4DH43 119 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 K7N7A8 449 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 GEMIN2O14893 280 aaKnown RBP10.92□□□□□ -0.66
GTF3A-209ENST00000640289 DEGS1O15121 323 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 MPIG6BO95866 241 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 TK1P04183 234 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 SLC2A2P11168 524 aaPredicted RBP10.92□□□□□ -0.66
GTF3A-209ENST00000640289 GTF2F2P13984 249 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 MGMTP16455 207 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 GABRR1P24046 479 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 GPR176Q14439 515 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 IL13RA2Q14627 380 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 RAB11BQ15907 218 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 DCAF12L2Q5VW00 463 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 SLC16A12Q6ZSM3 486 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 GPR141Q7Z602 305 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 LURAP1LQ8IV03 231 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 OR4S1Q8NGB4 309 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 OR51D1Q8NGF3 324 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 RAB40AQ8WXH6 277 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 SNX22Q96L94 193 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 NUDT16L1Q9BRJ7 211 aaKnown RBP10.92□□□□□ -0.66
GTF3A-209ENST00000640289 DCTN5Q9BTE1 182 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 SELENOIQ9C0D9 397 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 GHRLQ9UBU3 117 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 STEAP1Q9UHE8 339 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 INSIG2Q9Y5U4 225 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 ABCA2Q9BZC7 2435 aa10.92□□□□□ -0.66
GTF3A-209ENST00000640289 YLPM1P49750 1951 aaKnown RBP10.91□□□□□ -0.66
GTF3A-209ENST00000640289 A0A0B4J203 849 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 PPIAL4CA0A0B4J2A2 164 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 A0A0G2JMP0 313 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 A0A0X1KG70 313 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 IFITM5A6NNB3 132 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 TMEM14DPA8MWL7 114 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 INAFM1C9JVW0 142 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 SLC33A1O00400 549 aaPredicted RBP10.91□□□□□ -0.66
GTF3A-209ENST00000640289 HSPB6O14558 160 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 BPNT1O95861 308 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 AVPP01185 164 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 UBBP0CG47 229 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 ARSBP15848 533 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 LMO1P25800 156 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 OR3A1P47881 315 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 PSMD7P51665 324 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 NCS1P62166 190 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 QRFPP83859 136 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 PLA2G7Q13093 441 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 UNC119Q13432 240 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 GRK1Q15835 563 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 TAF9Q16594 264 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 CR1LQ2VPA4 569 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 NHLRC3Q5JS37 347 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 GPR107Q5VW38 600 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 CD276Q5ZPR3 534 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 IL17RELQ6ZVW7 336 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 TPRA1Q86W33 373 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 TPRX1Q8N7U7 411 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 OR4M2Q8NGB6 313 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 OR4M1Q8NGD0 313 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 CYYR1Q96J86 154 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 Q96M66 194 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 TMPRSS13Q9BYE2 586 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 FAM234AQ9H0X4 552 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 CST11Q9H112 138 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 PPA2Q9H2U2 334 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 PCDHB16Q9NRJ7 776 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 C19orf12Q9NSK7 152 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 RPUSD1Q9UJJ7 312 aaKnown RBP10.91□□□□□ -0.66
GTF3A-209ENST00000640289 ACANP16112 2415 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 F8P00451 2351 aa10.91□□□□□ -0.66
GTF3A-209ENST00000640289 MAP1AP78559 2803 aaPredicted RBP10.9□□□□□ -0.66
GTF3A-209ENST00000640289 TRAV24A0A0B4J272 114 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 KIR2DS1A0A191URI9 304 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 MEX3AA1L020 520 aaKnown RBP10.9□□□□□ -0.66
GTF3A-209ENST00000640289 NOTOA8MTQ0 251 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 AIPO00170 330 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 GPR37O15354 613 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 ENSAO43768 121 aaKnown RBP10.9□□□□□ -0.66
GTF3A-209ENST00000640289 OR7C1O76099 320 aaPredicted RBP10.9□□□□□ -0.66
GTF3A-209ENST00000640289 ECDO95905 644 aaPredicted RBP10.9□□□□□ -0.66
GTF3A-209ENST00000640289 PPIAL4GP0DN37 164 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 RPL5P46777 297 aaKnown RBP10.9□□□□□ -0.66
GTF3A-209ENST00000640289 EDDM3BP56851 147 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 VBP1P61758 197 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 EDDM3AQ14507 147 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 C2orf76Q3KRA6 126 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 ATAD3CQ5T2N8 411 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 BRICD5Q6PL45 260 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 BTNL3Q6UXE8 466 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 ANKRD13BQ86YJ7 626 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 OR8H2Q8N162 312 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 BPIFB2Q8N4F0 458 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 CHST4Q8NCG5 386 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 LY6G5BQ8NDX9 201 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 KCNG3Q8TAE7 436 aa10.9□□□□□ -0.66
GTF3A-209ENST00000640289 FAM3DQ96BQ1 224 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms