RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 IGHV1-8P0DP01 117 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 TMEM225BP0DP42 221 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 OR3A1P47881 315 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 SOX2P48431 317 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 KISS1Q15726 138 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 OR2G6Q5TZ20 316 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 LHFPL4Q7Z7J7 247 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 TRAPPC6BQ86SZ2 158 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 SAXO1Q8IYX7 474 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 DHRSXQ8N5I4 330 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 PACRGLQ8N7B6 248 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 SETD9Q8NE22 299 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 LINC00312Q9Y6C7 94 aa13.61□□□□□ -0.23
CACNA1A-259ENST00000638114 ALX3O95076 343 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 OR2H2O95918 312 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 ZNF44P15621 663 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 MYL12AP19105 171 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 RAB3AP20336 220 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 P2RX3P56373 397 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 SCN1BQ07699 218 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 DYNC1I2Q13409 638 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 IL18R1Q13478 541 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 CDK5R1Q15078 307 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 XAF1Q6GPH4 301 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 RPL22L1Q6P5R6 122 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 CRIP3Q6Q6R5 217 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 GPR148Q8TDV2 347 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 RGP1Q92546 391 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 C16orf95Q9H693 158 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 RHOFQ9HBH0 211 aa13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 EXOSC1Q9Y3B2 195 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-259ENST00000638114 MAGEB3O15480 346 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 CD2P06729 351 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 PROK1P58294 105 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 ZP1P60852 638 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 ADARB1P78563 741 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 MED21Q13503 144 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 AANATQ16613 207 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 CCDC58Q4VC31 144 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 PLA1AQ53H76 456 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 CPNE2Q96FN4 548 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 GPER1Q99527 375 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 CITED1Q99966 193 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 TAS2R4Q9NYW5 299 aa13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 DIMT1Q9UNQ2 313 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 TBL2Q9Y4P3 447 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-259ENST00000638114 FUOMA2VDF0 154 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 FAM90A8PA6NJQ4 464 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 ODF3BA8MYP8 253 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 TSPAN9O75954 239 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 CLPXO76031 633 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 ERP29P30040 261 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 KRTAP10-3P60369 221 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 ZNF626Q68DY1 528 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 TREML4Q6UXN2 200 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 SATL1Q86VE3 508 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 OR11H6Q8NGC7 330 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 OR51A2Q8NGJ7 313 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 FOXRED1Q96CU9 486 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 TMEM80Q96HE8 168 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 CHCHD3Q9NX63 227 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 BABAM2Q9NXR7 383 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 CLEC2DQ9UHP7 191 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 SESN1Q9Y6P5 492 aa13.58□□□□□ -0.24
CACNA1A-259ENST00000638114 TRGV10A0A0A0MS01 117 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 ANKRD65E5RJM6 399 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 DEGS1O15121 323 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 LMO1P25800 156 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 GABRA5P31644 462 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 AESQ08117 197 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 FAM189A2Q15884 450 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 SSX2Q16385 188 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 ASPHD2Q6ICH7 369 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 SLC35E4Q6ICL7 350 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 Q6P435 159 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 DYNAPQ8N1N2 210 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 CHST4Q8NCG5 386 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 RPS4Y2Q8TD47 263 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 TNFAIP8L1Q8WVP5 186 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 TMEM106AQ96A25 262 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 SMIM19Q96E16 107 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 FAM192AQ9GZU8 254 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 RAB18Q9NP72 206 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 ING3Q9NXR8 418 aa13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 UBE2J1Q9Y385 318 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 SIRT4Q9Y6E7 314 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-259ENST00000638114 IGHV2-26A0A0B4J1V2 119 aa13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 A0A0G2JK05 382 aa13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 SLC33A1O00400 549 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 GABRPO00591 440 aa13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 CAPGP40121 348 aa13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 GLIPR1P48060 266 aa13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 MTNR1BP49286 362 aa13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 PPP3R1P63098 170 aa13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 ATXN7L3Q14CW9 347 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 OGFRL1Q5TC84 451 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 ZNF529Q6P280 563 aa13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 C8orf59Q8N0T1 100 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 PXT1Q8NFP0 134 aa13.56□□□□□ -0.24
CACNA1A-259ENST00000638114 OR4C13Q8NGP0 309 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms