RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 DHDHQ9UQ10 334 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 ODF3BA8MYP8 253 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 SULT1B1O43704 296 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 LALBAP00709 142 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 HCKP08631 526 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 SCN1BQ07699 218 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 SLC35E4Q6ICL7 350 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 TREML4Q6UXN2 200 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 PARP16Q8N5Y8 322 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 OR13C5Q8NGS8 318 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 COMMD4Q9H0A8 199 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 EXOSC4Q9NPD3 245 aaKnown RBP14.35□□□□□ -0.11
PNKP-230ENST00000638016 TAS2R4Q9NYW5 299 aa14.35□□□□□ -0.11
PNKP-230ENST00000638016 hCG_1809904A0A1W2PP81 198 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 A0A1W2PPE2 198 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 A0A1W2PR64 198 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 A0A1W2PRV1 198 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 FAM172BPA6NC97 362 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 FAM90A8PA6NJQ4 464 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 TSPAN9O75954 239 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 CLPXO76031 633 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 CCDC159P0C7I6 412 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 TMEM225BP0DP42 221 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 TGFBR2P37173 567 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 GDNFP39905 211 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 LGALS4P56470 323 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 DYNC1I2Q13409 638 aaKnown RBP14.34□□□□□ -0.11
PNKP-230ENST00000638016 CDK5R1Q15078 307 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 KISS1Q15726 138 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 KLHL22Q53GT1 634 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 SPIN3Q5JUX0 258 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 ZNF626Q68DY1 528 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 Q6P435 159 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 SERPINA12Q8IW75 414 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 RDH12Q96NR8 316 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 JAM3Q9BX67 310 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 C16orf95Q9H693 158 aa14.34□□□□□ -0.11
PNKP-230ENST00000638016 hADV38S2A0JD32 116 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 GABRPO00591 440 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 HSPB6O14558 160 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 MGST3O14880 152 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 WIPF1O43516 503 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 GNAO1P09471 354 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 ZNF44P15621 663 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 GLIPR1P48060 266 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 P2RX3P56373 397 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 ADARB1P78563 741 aaKnown RBP14.33□□□□□ -0.12
PNKP-230ENST00000638016 MEF2CQ06413 473 aaPredicted RBP14.33□□□□□ -0.12
PNKP-230ENST00000638016 AESQ08117 197 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 DOC2BQ14184 412 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 SSX2Q16385 188 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 UTF1Q5T230 341 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 PRAMEF5Q5TYX0 476 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 LAIR2Q6ISS4 152 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 CCBE1Q6UXH8 406 aaPredicted RBP14.33□□□□□ -0.12
PNKP-230ENST00000638016 TRAPPC6BQ86SZ2 158 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 ZFP41Q8N8Y5 198 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 OR10K1Q8NGX5 313 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 RPS4Y2Q8TD47 263 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 COQ2Q96H96 371 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 SEBOXQ9HB31 216 aaPredicted RBP14.33□□□□□ -0.12
PNKP-230ENST00000638016 ZNF581Q9P0T4 197 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 LINC00312Q9Y6C7 94 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 VWFP04275 2813 aa14.33□□□□□ -0.12
PNKP-230ENST00000638016 A0A0G2JK05 382 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 SH2D1BO14796 132 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 KCNAB3O43448 404 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 ATXN7L3Q14CW9 347 aaPredicted RBP14.32□□□□□ -0.12
PNKP-230ENST00000638016 FAM189A2Q15884 450 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 ZNF529Q6P280 563 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 TMEM219Q86XT9 240 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 OR11H6Q8NGC7 330 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 OR5D14Q8NGL3 314 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 OR13D1Q8NGV5 346 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 NR1H4Q96RI1 486 aaPredicted RBP14.32□□□□□ -0.12
PNKP-230ENST00000638016 SESN1Q9Y6P5 492 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 MEGF8Q7Z7M0 2845 aa14.32□□□□□ -0.12
PNKP-230ENST00000638016 IGHV2-26A0A0B4J1V2 119 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 SLC33A1O00400 549 aaPredicted RBP14.31□□□□□ -0.12
PNKP-230ENST00000638016 TSPAN15O95858 294 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 RBP4P02753 201 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 RPSAP08865 295 aaKnown RBP14.31□□□□□ -0.12
PNKP-230ENST00000638016 DCKP27707 260 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 GABRA5P31644 462 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 OR3A4PP47883 348 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 MRPL28Q13084 256 aaKnown RBP14.31□□□□□ -0.12
PNKP-230ENST00000638016 HABP2Q14520 560 aaPredicted RBP14.31□□□□□ -0.12
PNKP-230ENST00000638016 SATL1Q86VE3 508 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 SAXO1Q8IYX7 474 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 FAM192AQ9GZU8 254 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 PPIL3Q9H2H8 161 aaKnown RBP14.31□□□□□ -0.12
PNKP-230ENST00000638016 TCF7L1Q9HCS4 588 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 DIMT1Q9UNQ2 313 aaKnown RBP14.31□□□□□ -0.12
PNKP-230ENST00000638016 FOXJ3Q9UPW0 622 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 HILPDAQ9Y5L2 63 aa14.31□□□□□ -0.12
PNKP-230ENST00000638016 MAGEA13PA6NCF6 341 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 XPNPEP2O43895 674 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 ALX3O95076 343 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 RAB3AP20336 220 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 LMO1P25800 156 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms