RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 C15orf62A8K5M9 175 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 VWC2LB2RUY7 222 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 EEF1E1-BLOC1S5C9J1V9 151 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 J3KT08 172 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 EEF1E1O43324 174 aaKnown RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 ZNF207O43670 478 aaKnown RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 PIAS1O75925 651 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 KBTBD11O94819 623 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 YIF1AO95070 293 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 NXPH3O95157 252 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 CDRT1O95170 752 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 CLDN14O95500 239 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 TTRP02766 147 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 OPN1SWP03999 348 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 OR5G3P0C626 314 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 HKR1P10072 659 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 PSG2P11465 335 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 FGF3P11487 239 aaPredicted RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 FOLR2P14207 255 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 GNB3P16520 340 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 ZNF708P17019 499 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 RPL7P18124 248 aaKnown RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 ORM2P19652 201 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 RAB3BP20337 219 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 USF1P22415 310 aaPredicted RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 CMPK1P30085 196 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 TSPOP30536 169 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 SPRP35270 261 aaPredicted RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 GABRA2P47869 451 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 RFX2P48378 723 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 AMTP48728 403 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 FABP6P51161 128 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 SUB1P53999 127 aaKnown RBP eCLIP2.48□□□□□ -2.015e-11■■■□□ 15.3
VIM-210ENST00000637053 EMP1P54849 157 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 B3GALT5-AS1P59052 145 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 SLC35A2P78381 396 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 HIST1H1AQ02539 215 aaPredicted RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 SLC25A11Q02978 314 aaKnown RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 POU3F1Q03052 451 aaPredicted RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 MXD1Q05195 221 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 ZNF763Q0D2J5 394 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 HTR4Q13639 388 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 RUNX3Q13761 415 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 EBPQ15125 230 aaKnown RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 RGNQ15493 299 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 ZNF726P1Q15940 193 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 CTF1Q16619 201 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 GUCA2BQ16661 112 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 CCSMST1Q4G0I0 132 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 AWAT1Q58HT5 328 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 LDLRAD2Q5SZI1 272 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 SLC18B1Q6NT16 456 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 FBXL22Q6P050 247 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 ARL9Q6T311 187 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 STAC2Q6ZMT1 411 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 Q6ZTK2 550 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 GOLT1AQ6ZVE7 132 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 Q6ZVH6 145 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 PRSS48Q7RTY5 328 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 NEGR1Q7Z3B1 354 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 PRR22Q8IZ63 422 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 GVQW1Q8N7I0 195 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 SUMF1Q8NBK3 374 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 OR5A1Q8NGJ0 315 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 OR51Q1Q8NH59 317 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 OR5W2Q8NH69 310 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 OR1S1Q8NH92 325 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 MFSD8Q8NHS3 518 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 OLIG1Q8TAK6 271 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 FBXO25Q8TCJ0 367 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 ZNF675Q8TD23 568 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 THEM6Q8WUY1 208 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 CYGBQ8WWM9 190 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 AURKBQ96GD4 344 aaPredicted RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 C4orf45Q96LM5 186 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 CNBD2Q96M20 576 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 OR4K3Q96R72 315 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 KXD1Q9BQD3 176 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 RTBDNQ9BSG5 229 aaPredicted RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 TEX101Q9BY14 249 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 SMIM3Q9BZL3 60 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 ULBP3Q9BZM4 244 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 NKX6-2Q9C056 277 aaPredicted RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 LPAR5Q9H1C0 372 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 ISG20L2Q9H9L3 353 aaKnown RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 PNRC2Q9NPJ4 139 aaKnown RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 GPR84Q9NQS5 396 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 LYRM2Q9NU23 88 aaPredicted RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 MRPL16Q9NX20 251 aaKnown RBP2.48□□□□□ -2.01
VIM-210ENST00000637053 MED11Q9P086 117 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 NAT8BQ9UHF3 227 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 PPP2R2CQ9Y2T4 447 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 CACNA1FO60840 1977 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 PTPRTO14522 1441 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 PIK3C2GO75747 1445 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 GAPVD1Q14C86 1478 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 TRAV39A0A0B4J263 110 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 FAM236DA0A1B0GTK5 79 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 WDR27A2RRH5 827 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 OR5H15A6NDH6 313 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms