RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 UQCC2Q9BRT2 126 aa6.8□□□□□ -1.32
PNKP-226ENST00000636840 BARHL1Q9BZE3 327 aa6.8□□□□□ -1.32
PNKP-226ENST00000636840 HEXA-AS1Q9H8Q6 139 aa6.8□□□□□ -1.32
PNKP-226ENST00000636840 OPN4Q9UHM6 478 aa6.8□□□□□ -1.32
PNKP-226ENST00000636840 ABCA2Q9BZC7 2435 aa6.8□□□□□ -1.32
PNKP-226ENST00000636840 ANK3Q12955 4377 aaKnown RBP6.8□□□□□ -1.32
PNKP-226ENST00000636840 ZFHX3Q15911 3703 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 TRAV8-7A0A075B6U6 113 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 A0A087WXM4 84 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 IGKV1-12A0A0C4DH73 117 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 A0A1B0GW55 424 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 F8VVB4 439 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 F8VWA3 439 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 SIRPB1O00241 398 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 PDCD5O14737 125 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 OR2H2O95918 312 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 IGKV1D-12P01611 117 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 SFTPBP07988 381 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 UCHL1P09936 223 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 UBBP0CG47 229 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 DUX4L2P0CJ85 424 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 DUX4L3P0CJ86 424 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 DUX4L4P0CJ87 422 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 DUX4L5P0CJ88 424 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 DUX4L6P0CJ89 424 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 DUX4L7P0CJ90 424 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 CALCBP10092 127 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 SELLP14151 372 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 GALP22466 123 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 LMO1P25800 156 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 CEBPDP49716 269 aaPredicted RBP6.79□□□□□ -1.32
PNKP-226ENST00000636840 GUCA2AQ02747 115 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 KCTD21Q4G0X4 260 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 SLC22A6Q4U2R8 563 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 UBE2UQ5VVX9 321 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 AWAT2Q6E213 333 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 DUX4L9Q6RFH8 374 aaPredicted RBP6.79□□□□□ -1.32
PNKP-226ENST00000636840 GLIPR1L1Q6UWM5 242 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 C1orf229Q6ZS94 237 aaPredicted RBP6.79□□□□□ -1.32
PNKP-226ENST00000636840 ZNF565Q8N9K5 539 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 Q8NFD4 153 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 OR51T1Q8NGJ9 327 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 ORAI1Q96D31 301 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 CST11Q9H112 138 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 METTL8Q9H825 291 aaKnown RBP6.79□□□□□ -1.32
PNKP-226ENST00000636840 SPACA1Q9HBV2 294 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 IL36GQ9NZH8 169 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 DUX4Q9UBX2 424 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 SSR3Q9UNL2 185 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 ST3GAL6Q9Y274 331 aa6.79□□□□□ -1.32
PNKP-226ENST00000636840 MRPS28Q9Y2Q9 187 aaKnown RBP6.79□□□□□ -1.32
PNKP-226ENST00000636840 SF3B6Q9Y3B4 125 aaKnown RBP6.79□□□□□ -1.32
PNKP-226ENST00000636840 TRGV10A0A0A0MS01 117 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 PIN1P1O15428 100 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 ZNF737O75373 536 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 OR7C1O76099 320 aaPredicted RBP6.78□□□□□ -1.32
PNKP-226ENST00000636840 CDRT1O95170 752 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 TFF1P04155 84 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 SERPINA2P20848 420 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 PRTN3P24158 256 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 MYL9P24844 172 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 CALRP27797 417 aaKnown RBP6.78□□□□□ -1.32
PNKP-226ENST00000636840 ERP29P30040 261 aaKnown RBP6.78□□□□□ -1.32
PNKP-226ENST00000636840 OR3A4PP47883 348 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 KCNJ3P48549 501 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 LGALS4P56470 323 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 RPS25P62851 125 aaKnown RBP6.78□□□□□ -1.32
PNKP-226ENST00000636840 RBM39Q14498 530 aaKnown RBP6.78□□□□□ -1.32
PNKP-226ENST00000636840 MPV17LQ2QL34 196 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 KRTAP21-3Q3LHN1 58 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 PAN3Q58A45 887 aaKnown RBP6.78□□□□□ -1.32
PNKP-226ENST00000636840 ATAD3CQ5T2N8 411 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 NCR3LG1Q68D85 454 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 TMEM200BQ69YZ2 307 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 USP43Q70EL4 1123 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 VMO1Q7Z5L0 202 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 TRAPPC6BQ86SZ2 158 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 OR4M1Q8NGD0 313 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 OR10K1Q8NGX5 313 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 TMEM158Q8WZ71 300 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 LHX4Q969G2 390 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 MUL1Q969V5 352 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 ZDHHC16Q969W1 377 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 DACT3Q96B18 629 aaPredicted RBP6.78□□□□□ -1.32
PNKP-226ENST00000636840 SIRPDQ9H106 197 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 PLGRKTQ9HBL7 147 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 FAM96BQ9Y3D0 163 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 NF1P21359 2839 aa6.78□□□□□ -1.32
PNKP-226ENST00000636840 TRAV40A0A0B4J280 105 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 IGHV1-69DA0A0B4J2H0 117 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 A0A0G2JK05 382 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 CENPVL3A0A0U1RRI6 287 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 TRDV1A0A1B0GX56 115 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 TMEM82A0PJX8 343 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 FAM90A10PA6NDY2 464 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 FAM90A18PA6NE21 464 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 FAM90A16PA6NEW6 464 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 FAM90A20PA6NIJ5 464 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 FAM90A8PA6NJQ4 464 aa6.77□□□□□ -1.33
PNKP-226ENST00000636840 FAM90A7PA6NKC0 464 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms