RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 OR5D13Q8NGL4 314 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 C8orf46Q8TAG6 207 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 FOXRED1Q96CU9 486 aaPredicted RBP12.79□□□□□ -0.36
CLN6-211ENST00000635754 DMRTB1Q96MA1 342 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 SIRPB1O00241 398 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 ZNF737O75373 536 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 OR2H2O95918 312 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 ZNF44P15621 663 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 SERPINA2P20848 420 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 GABRR1P24046 479 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 CALRP27797 417 aaKnown RBP12.79□□□□□ -0.36
CLN6-211ENST00000635754 SCGB2A2Q13296 93 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 GPR176Q14439 515 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 CD200R1LQ6Q8B3 271 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 GDPD3Q7L5L3 318 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 CMTM4Q8IZR5 234 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 OR8H2Q8N162 312 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 CHST4Q8NCG5 386 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 Q8NFD4 153 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 OR51T1Q8NGJ9 327 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 PPP1R35Q8TAP8 253 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 SNX22Q96L94 193 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 NR1H4Q96RI1 486 aaPredicted RBP12.79□□□□□ -0.36
CLN6-211ENST00000635754 ZNF696Q9H7X3 374 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 ONECUT1Q9UBC0 465 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 MXRA5Q9NR99 2828 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 TRDV1A0A1B0GX56 115 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 TOX4O94842 621 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 GALP22466 123 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 RPL31P62899 125 aaKnown RBP12.78□□□□□ -0.36
CLN6-211ENST00000635754 SCN1BQ07699 218 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 IL13RA2Q14627 380 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 GRK1Q15835 563 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 SLC22A6Q4U2R8 563 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 SYT6Q5T7P8 510 aaPredicted RBP12.78□□□□□ -0.36
CLN6-211ENST00000635754 GLIPR1L1Q6UWM5 242 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 C17orf107Q6ZR85 190 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 LYPD6Q86Y78 171 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 FAM185AQ8N0U4 392 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 OSR2Q8N2R0 312 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 KIR3DL3Q8N743 410 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 OR4D6Q8NGJ1 314 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 TBC1D15Q8TC07 691 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 UPRTQ96BW1 309 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 PCGF1Q9BSM1 259 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 KPTNQ9Y664 436 aa12.78□□□□□ -0.36
CLN6-211ENST00000635754 TMEM82A0PJX8 343 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 DEGS1O15121 323 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 PSPNO60542 156 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 FSHBP01225 129 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 GTF2F2P13984 249 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 MYL9P24844 172 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 LMO1P25800 156 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 EDDM3BP56851 147 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 ARF6P62330 175 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 PIGYQ3MUY2 71 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 NHLRC3Q5JS37 347 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 WDFY2Q96P53 400 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 CHST6Q9GZX3 395 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 SIRPDQ9H106 197 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 C19orf12Q9NSK7 152 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 STUB1Q9UNE7 303 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 ST3GAL6Q9Y274 331 aa12.77□□□□□ -0.37
CLN6-211ENST00000635754 SVEP1Q4LDE5 3571 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 TRAV40A0A0B4J280 105 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 A0A1W2PPH5 198 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 MGST3O14880 152 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 UBBP0CG47 229 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 OR3A1P47881 315 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 RBM11P57052 281 aaKnown RBP12.76□□□□□ -0.37
CLN6-211ENST00000635754 EDDM3AQ14507 147 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 C1orf100Q5SVJ3 147 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 Q6P435 159 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 LINC00596Q86U02 117 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 OR4S1Q8NGB4 309 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 OR4M1Q8NGD0 313 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 POM121Q96HA1 1249 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 GHRLQ9UBU3 117 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 ZFHX3Q15911 3703 aa12.76□□□□□ -0.37
CLN6-211ENST00000635754 DSCAML1Q8TD84 2053 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 TRAV1-2A0A0B4J238 106 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 A0A0G2JK05 382 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 A0A1W2PP11 408 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 SLC33A1O00400 549 aaPredicted RBP12.75□□□□□ -0.37
CLN6-211ENST00000635754 IFNA2P01563 188 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 MMP9P14780 707 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 EPHA1P21709 976 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 HTR2CP28335 458 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 BLMHQ13867 455 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 PDCD1Q15116 288 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 C22orf42Q6IC83 251 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 OR6M1Q8NGM8 313 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 MRPS24Q96EL2 167 aaKnown RBP12.75□□□□□ -0.37
CLN6-211ENST00000635754 C1orf147Q96MC9 270 aaPredicted RBP12.75□□□□□ -0.37
CLN6-211ENST00000635754 CST11Q9H112 138 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 PPA2Q9H2U2 334 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 PLGRKTQ9HBL7 147 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 NUP50Q9UKX7 468 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 SSR3Q9UNL2 185 aa12.75□□□□□ -0.37
CLN6-211ENST00000635754 AK6Q9Y3D8 172 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms