RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 RGS16O15492 202 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CLOCKO15516 846 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 EIF4E2O60573 245 aaKnown RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 PLIN3O60664 434 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 NPIPB7O75200 414 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 SMIM24O75264 130 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 WBP4O75554 376 aaKnown RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 RP2O75695 350 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 KRT6AP02538 564 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 C1QCP02747 245 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 HMGN2P05204 90 aaKnown RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CRYGBP07316 175 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CECR9P0C854 216 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 PABPC4LP0CB38 370 aaKnown RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 PRPS2P11908 318 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 NEFHP12036 1026 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 IGLL1P15814 213 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 GGT1P19440 569 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 PTNP21246 168 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ZP3P21754 424 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 USF1P22415 310 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ME2P23368 584 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 IL32P24001 234 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CALCRP30988 508 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 GABRA3P34903 492 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 DDOSTP39656 456 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 SERPINB9P50453 376 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 PRRX1P54821 245 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CTBP2P56545 445 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CARD18P57730 90 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 MRPL28Q13084 256 aaKnown RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 GK3PQ14409 553 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 QPRTQ15274 297 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 RCN1Q15293 331 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNHIT3Q15649 155 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 MAPK14Q16539 360 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 Q1RN00 199 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 TIMM50Q3ZCQ8 353 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 VPS26BQ4G0F5 336 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ATP6AP1LQ52LC2 224 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 DMRTC1Q5HYR2 192 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 OR2B11Q5JQS5 317 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CCNJQ5T5M9 372 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 RNLSQ5VYX0 342 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 FBXW9Q5XUX1 488 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CYB5R2Q6BCY4 276 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CLEC6AQ6EIG7 209 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ANKRD26P1Q6NSI1 321 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CGB2Q6NT52 195 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 TMPPEQ6ZT21 453 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 UTS2BQ765I0 119 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 WDFY1Q8IWB7 410 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 GPR137CQ8N3F9 429 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CADM2Q8N3J6 435 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 OR5W2Q8NH69 310 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 OR56B4Q8NH76 319 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 KCNG3Q8TAE7 436 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ACMSDQ8TDX5 336 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CDS1Q92903 461 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 HAVCR1Q96D42 359 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 SEC22AQ96IW7 307 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ARL5BQ96KC2 179 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF317Q96PQ6 595 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CLCC1Q96S66 551 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 SDF2Q99470 211 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 RSPO3Q9BXY4 272 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ANKRD19PQ9H560 264 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 REEP4Q9H6H4 257 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF442Q9H7R0 627 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 MYOZ1Q9NP98 299 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 SDHAF3Q9NRP4 125 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ACER3Q9NUN7 267 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 COPS3Q9UNS2 423 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CAB39Q9Y376 341 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 TMED5Q9Y3A6 229 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 HDGFL3Q9Y3E1 203 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 POLR3HQ9Y535 204 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 TIMM22Q9Y584 194 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 DNAJC15Q9Y5T4 150 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 FLVCR1Q9Y5Y0 555 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 KCNE3Q9Y6H6 103 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 TENM2Q9NT68 2774 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 EPPK1P58107 5090 aaKnown RBP1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 WNK2Q9Y3S1 2297 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 IGLV8-61A0A075B6I0 122 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 IGHV1OR15-1A0A075B7D0 117 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 RPL36A-HNRNPH2H7BZ11 118 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 TCF21O43680 179 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 TRAF3IP2O43734 574 aaPredicted RBP1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF254O75437 659 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 SUPT7LO94864 414 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 CST1P01037 141 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 GAPDHP04406 335 aaKnown RBP1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 FGF4P08620 206 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 SNRPAP09012 282 aaKnown RBP1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 TROVE2P10155 538 aaKnown RBP eCLIP1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF14P17017 642 aaPredicted RBP1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 VDAC1P21796 283 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 GALP22466 123 aa1.82□□□□□ -2.12
SMARCB1-208ENST00000634926 FASP25445 335 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms