RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 GRK1Q15835 563 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 GDPD3Q7L5L3 318 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 EGFL6Q8IUX8 553 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 BVESQ8NE79 360 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 OR2G2Q8NGZ5 317 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 SNX22Q96L94 193 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 SLC7A11Q9UPY5 501 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 TBL2Q9Y4P3 447 aaKnown RBP9.18□□□□□ -0.94
CPNE3-210ENST00000621245 E9PQ18 207 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
CPNE3-210ENST00000621245 GATBO75879 557 aaKnown RBP9.17□□□□□ -0.94
CPNE3-210ENST00000621245 RBP4P02753 201 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 PRKACAP17612 351 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 AZGP1P25311 298 aaKnown RBP9.17□□□□□ -0.94
CPNE3-210ENST00000621245 OR12D2P58182 307 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 ACTR3P61158 418 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 CNN3Q15417 329 aaKnown RBP9.17□□□□□ -0.94
CPNE3-210ENST00000621245 C1orf146Q5VVC0 180 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 C10orf99Q6UWK7 81 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 ZNF676Q8N7Q3 588 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 OR5D18Q8NGL1 313 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 OR4P4Q8NGL7 312 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 OR13D1Q8NGV5 346 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 RPS4Y2Q8TD47 263 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 FGGYQ96C11 551 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 FOXRED1Q96CU9 486 aaPredicted RBP9.17□□□□□ -0.94
CPNE3-210ENST00000621245 BORCS8Q96FH0 119 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 OSBPL10Q9BXB5 764 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 RAB18Q9NP72 206 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 SESN1Q9Y6P5 492 aa9.17□□□□□ -0.94
CPNE3-210ENST00000621245 TRBV2A0A0J9YWF9 115 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 hCG_1809904A0A1W2PP81 198 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 A0A1W2PPE2 198 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 A0A1W2PR64 198 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 A0A1W2PRV1 198 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 A0A1W2PRX2 142 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 F2RL2O00254 374 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 SULT1C4O75897 302 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 ALX3O95076 343 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 UBCP0CG48 685 aaKnown RBP9.16□□□□□ -0.94
CPNE3-210ENST00000621245 ATF1P18846 271 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 RAB6AP20340 208 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 P2RX3P56373 397 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 SLC34A1Q06495 639 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 TCTEX1D4Q5JR98 221 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 C11orf88Q6PI97 169 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 FAM58AQ8N1B3 248 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 PYDC1Q8WXC3 89 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 MALSU1Q96EH3 234 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 RNFT2Q96EX2 444 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 COQ2Q96H96 371 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 TMEM133Q9H2Q1 129 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 ZNF286AQ9HBT8 521 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 ABCB10Q9NRK6 738 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.16□□□□□ -0.94
CPNE3-210ENST00000621245 LINC00312Q9Y6C7 94 aa9.16□□□□□ -0.94
CPNE3-210ENST00000621245 hADV38S2A0JD32 116 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 FAM90A22PA8MWA6 464 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 H3BNX3 289 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 DYNC1I1O14576 645 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 OR2H2O95918 312 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 GLIPR1P48060 266 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 RBP2P50120 134 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 DYNLT3P51808 116 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 MTCP1P56278 107 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 SUMO1P63165 101 aaKnown RBP9.15□□□□□ -0.94
CPNE3-210ENST00000621245 MEF2CQ06413 473 aaPredicted RBP9.15□□□□□ -0.94
CPNE3-210ENST00000621245 AESQ08117 197 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 PDZK1IP1Q13113 114 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 ZNF146Q15072 292 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 ZIK1Q3SY52 487 aaPredicted RBP9.15□□□□□ -0.94
CPNE3-210ENST00000621245 FAM220AQ7Z4H9 259 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 OR8J1Q8NGP2 316 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 OR13C9Q8NGT0 318 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 NDNFQ8TB73 568 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 R3HDM4Q96D70 268 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 PELI1Q96FA3 418 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 CENPNQ96H22 339 aaPredicted RBP9.15□□□□□ -0.94
CPNE3-210ENST00000621245 RCC1LQ96I51 464 aaKnown RBP9.15□□□□□ -0.94
CPNE3-210ENST00000621245 MBOAT4Q96T53 435 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 ADI1Q9BV57 179 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 CLEC7AQ9BXN2 247 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 PPIL3Q9H2H8 161 aaKnown RBP9.15□□□□□ -0.94
CPNE3-210ENST00000621245 ISG20L2Q9H9L3 353 aaKnown RBP9.15□□□□□ -0.94
CPNE3-210ENST00000621245 HMG20AQ9NP66 347 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 ING3Q9NXR8 418 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 ZNF581Q9P0T4 197 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 GSTK1Q9Y2Q3 226 aa9.15□□□□□ -0.94
CPNE3-210ENST00000621245 OR4C45A6NMZ5 311 aa9.14□□□□□ -0.95
CPNE3-210ENST00000621245 E9PI62 339 aa9.14□□□□□ -0.95
CPNE3-210ENST00000621245 EI24O14681 340 aa9.14□□□□□ -0.95
CPNE3-210ENST00000621245 SLC16A6O15403 523 aa9.14□□□□□ -0.95
CPNE3-210ENST00000621245 AMY1AP04745 511 aa9.14□□□□□ -0.95
CPNE3-210ENST00000621245 AMY2AP04746 511 aa9.14□□□□□ -0.95
CPNE3-210ENST00000621245 ALPLP05186 524 aa9.14□□□□□ -0.95
CPNE3-210ENST00000621245 CDK2P24941 298 aa9.14□□□□□ -0.95
CPNE3-210ENST00000621245 PEX2P28328 305 aa9.14□□□□□ -0.95
CPNE3-210ENST00000621245 ATP6V1E1P36543 226 aa9.14□□□□□ -0.95
CPNE3-210ENST00000621245 VDAC2P45880 294 aaPredicted RBP9.14□□□□□ -0.95
CPNE3-210ENST00000621245 ATP1B3P54709 279 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms