RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ACSM4P0C7M7 580 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 ZNF19P17023 458 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 ZNF3P17036 446 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 ATF1P18846 271 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 CRABP1P29762 137 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 SLC6A6P31641 620 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 IKZF1Q13422 519 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 CDK5R1Q15078 307 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 KLHL12Q53G59 568 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 DNM1P34Q6PK57 102 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 COLCA1Q6ZS62 124 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 FAM90A1Q86YD7 464 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 OR13C5Q8NGS8 318 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 TRMT10AQ8TBZ6 339 aaKnown RBP6.43□□□□□ -1.38
CLK1-215ENST00000621181 MRAPQ8TCY5 172 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 NPRL2Q8WTW4 380 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 TSSK2Q96PF2 358 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 GFI1Q99684 422 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 NRIP3Q9NQ35 241 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 MCUBQ9NWR8 336 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 VSX1Q9NZR4 365 aaPredicted RBP6.43□□□□□ -1.38
CLK1-215ENST00000621181 RPUSD1Q9UJJ7 312 aaKnown RBP6.43□□□□□ -1.38
CLK1-215ENST00000621181 IER3IP1Q9Y5U9 82 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 KPTNQ9Y664 436 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 NOTOA8MTQ0 251 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 PRR32B1ATL7 298 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 ARPC3O15145 178 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 CTDSPLO15194 276 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 AKR7A2O43488 359 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 GMDSO60547 372 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 GYPBP06028 91 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 GRPP07492 148 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 OR2T7P0C7T2 308 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 HIST1H1CP16403 213 aaKnown RBP6.43□□□□□ -1.38
CLK1-215ENST00000621181 PYCR1P32322 319 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 HCCSP53701 268 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 ECH1Q13011 328 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 KLF9Q13886 244 aaPredicted RBP6.43□□□□□ -1.38
CLK1-215ENST00000621181 KCNMB1Q16558 191 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 RSPO1Q2MKA7 263 aaPredicted RBP6.43□□□□□ -1.38
CLK1-215ENST00000621181 LINC01590Q5TEZ4 76 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 SAMD5Q5TGI4 173 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 CFAP77Q6ZQR2 320 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 LINC00346Q8IVM7 164 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 CMTM4Q8IZR5 234 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 C9orf62Q8N4C0 152 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 OR2AJ1Q8NGZ0 328 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 OR2T27Q8NH04 317 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 SMIM19Q96E16 107 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 CMTM3Q96MX0 182 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 GPX7Q96SL4 187 aaPredicted RBP6.43□□□□□ -1.38
CLK1-215ENST00000621181 PPA2Q9H2U2 334 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 SIRT7Q9NRC8 400 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 C1orf123Q9NWV4 160 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 ABRACLQ9P1F3 81 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 DNAJB11Q9UBS4 358 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 COPS3Q9UNS2 423 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 GGT3PA6NGU5 568 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 A6NIN4 97 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 CD300LBA8K4G0 201 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 SMLR1H3BR10 107 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 DCTN6O00399 190 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 MAGEB4O15481 346 aaPredicted RBP6.42□□□□□ -1.38
CLK1-215ENST00000621181 GATBO75879 557 aaKnown RBP6.42□□□□□ -1.38
CLK1-215ENST00000621181 IFNGP01579 166 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 HLA-DQA2P01906 255 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 RAB3BP20337 219 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 CDKN2AP42771 156 aaKnown RBP6.42□□□□□ -1.38
CLK1-215ENST00000621181 RAB25P57735 213 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 HIST1H3AP68431 136 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 DGCR2P98153 550 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 HERPUD1Q15011 391 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 FCN2Q15485 313 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 MICBQ29980 383 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 TP53I3Q53FA7 332 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 KPRPQ5T749 579 aaPredicted RBP6.42□□□□□ -1.38
CLK1-215ENST00000621181 HIST2H3PS2Q5TEC6 136 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 ZNF57Q68EA5 555 aaPredicted RBP6.42□□□□□ -1.38
CLK1-215ENST00000621181 SLC35E4Q6ICL7 350 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 RPL22L1Q6P5R6 122 aaKnown RBP6.42□□□□□ -1.38
CLK1-215ENST00000621181 DPY19L2P2Q6ZN68 376 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 ZNF826PQ6ZT77 177 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 HIST2H3AQ71DI3 136 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 NAA40Q86UY6 237 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 C11orf44Q8N8P7 122 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 DTX3Q8N9I9 347 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 OR4K13Q8NH42 304 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 OR5R1Q8NH85 324 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 GRPEL2Q8TAA5 225 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 DEDD2Q8WXF8 326 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 RGP1Q92546 391 aaPredicted RBP6.42□□□□□ -1.38
CLK1-215ENST00000621181 PHYHIPQ92561 330 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 ERMAPQ96PL5 475 aaPredicted RBP6.42□□□□□ -1.38
CLK1-215ENST00000621181 ABCG5Q9H222 651 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 PLEKHA1Q9HB21 404 aa6.42□□□□□ -1.38
CLK1-215ENST00000621181 SRA1Q9HD15 236 aaKnown RBP6.42□□□□□ -1.38
CLK1-215ENST00000621181 RPRD1BQ9NQG5 326 aaKnown RBP6.42□□□□□ -1.38
CLK1-215ENST00000621181 IGHV3OR15-7A0A075B7D8 119 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 A0A0B4J203 849 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms