RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CD8AP01732 235 aa10.67□□□□□ -0.7
CIITA-212ENST00000618207 CA6P23280 308 aa10.67□□□□□ -0.7
CIITA-212ENST00000618207 PTGER4P35408 488 aa10.67□□□□□ -0.7
CIITA-212ENST00000618207 FGL1Q08830 312 aa10.67□□□□□ -0.7
CIITA-212ENST00000618207 COLCA1Q6ZS62 124 aa10.67□□□□□ -0.7
CIITA-212ENST00000618207 GPHA2Q96T91 129 aa10.67□□□□□ -0.7
CIITA-212ENST00000618207 ZNF391Q9UJN7 358 aa10.67□□□□□ -0.7
CIITA-212ENST00000618207 PRELID3BQ9Y3B1 194 aa10.67□□□□□ -0.7
CIITA-212ENST00000618207 KANTRA0A1W2PQU2 76 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 RNF222A6NCQ9 220 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 CD300LBA8K4G0 201 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 SELEP16581 610 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 MPGP29372 298 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 FCGR2CP31995 323 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 RBM11P57052 281 aaKnown RBP10.66□□□□□ -0.7
CIITA-212ENST00000618207 LPCAT3Q6P1A2 487 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 FAHD2BQ6P2I3 314 aaPredicted RBP10.66□□□□□ -0.7
CIITA-212ENST00000618207 ZDHHC23Q8IYP9 409 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 FAHD2AQ96GK7 314 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 HIST1H2AAQ96QV6 131 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.66□□□□□ -0.7
CIITA-212ENST00000618207 TNFSF18Q9UNG2 199 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 ANKRD11Q6UB99 2663 aaPredicted RBP10.66□□□□□ -0.7
CIITA-212ENST00000618207 F5H0A9 414 aaPredicted RBP10.66□□□□□ -0.7
CIITA-212ENST00000618207 CRHP06850 196 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 PSMB6P28072 239 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 ARR3P36575 388 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 HOXA1P49639 335 aaPredicted RBP10.66□□□□□ -0.7
CIITA-212ENST00000618207 ARL6IP1Q15041 203 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 Q6ZPA2 131 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 INO80EQ8NBZ0 244 aaPredicted RBP10.66□□□□□ -0.7
CIITA-212ENST00000618207 SLC30A7Q8NEW0 376 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 OR1K1Q8NGR3 316 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 SPSB4Q96A44 273 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 LGALS8O00214 317 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 HS3ST1O14792 307 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 PDCD6O75340 191 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 NMBP08949 121 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 NOVA1P51513 510 aaKnown RBP10.66□□□□□ -0.7
CIITA-212ENST00000618207 TMEM185AQ8NFB2 350 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 OR11L1Q8NGX0 322 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 SCGB3A2Q96PL1 93 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 MTCH1Q9NZJ7 389 aa10.66□□□□□ -0.7
CIITA-212ENST00000618207 CEP295Q9C0D2 2601 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 A0A1B0GWJ7 208 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 H0YIZ8 118 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 CLN5O75503 358 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 SCGB1D2O95969 90 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 HOXD4P09016 255 aaPredicted RBP10.65□□□□□ -0.7
CIITA-212ENST00000618207 PIGPP57054 158 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 IKZF1Q13422 519 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 NRN1LQ496H8 165 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 PEG10Q86TG7 708 aaKnown RBP10.65□□□□□ -0.7
CIITA-212ENST00000618207 TMEM200AQ86VY9 491 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 OR5L1Q8NGL2 311 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 RDH5Q92781 318 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 ZDHHC11Q9H8X9 412 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 OR5AC2Q9NZP5 309 aa10.65□□□□□ -0.7
CIITA-212ENST00000618207 A0A0B4J2A0 478 aa10.65□□□□□ -0.71
CIITA-212ENST00000618207 DBX1A6NMT0 343 aa10.65□□□□□ -0.71
CIITA-212ENST00000618207 AGFG2O95081 481 aa10.65□□□□□ -0.71
CIITA-212ENST00000618207 HOXA4Q00056 320 aaPredicted RBP10.65□□□□□ -0.71
CIITA-212ENST00000618207 RAB32Q13637 225 aa10.65□□□□□ -0.71
CIITA-212ENST00000618207 DAZAP2Q15038 168 aaPredicted RBP10.65□□□□□ -0.71
CIITA-212ENST00000618207 AANATQ16613 207 aa10.65□□□□□ -0.71
CIITA-212ENST00000618207 PXT1Q8NFP0 134 aa10.65□□□□□ -0.71
CIITA-212ENST00000618207 SCARB1Q8WTV0 552 aa10.65□□□□□ -0.71
CIITA-212ENST00000618207 RRNAD1Q96FB5 475 aaKnown RBP10.65□□□□□ -0.71
CIITA-212ENST00000618207 RYDENQ9NUL5 291 aaKnown RBP10.65□□□□□ -0.71
CIITA-212ENST00000618207 NECAP2Q9NVZ3 263 aa10.65□□□□□ -0.71
CIITA-212ENST00000618207 SHPKQ9UHJ6 478 aa10.65□□□□□ -0.71
CIITA-212ENST00000618207 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 MSGN1A6NI15 193 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 TRAPPC2LH3BP13 241 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 RHBDL1O75783 438 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 RRASP10301 218 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 RPS2P15880 293 aaKnown RBP10.64□□□□□ -0.71
CIITA-212ENST00000618207 FUT3P21217 361 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 CEACAM21Q3KPI0 293 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 ALKBH6Q3KRA9 238 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 ABCA11PQ4W5N1 156 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 VWA1Q6PCB0 445 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 OR6K3Q8NGY3 331 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 EXTL1Q92935 676 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 OR2S2Q9NQN1 319 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 PTPRBP23467 1997 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 ZGRF1Q86YA3 2104 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 TRAV39A0A0B4J263 110 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 PQLC2LA1A4F0 135 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 NUPL2O15504 423 aaKnown RBP10.64□□□□□ -0.71
CIITA-212ENST00000618207 IGHV1-2P23083 117 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 CALCRP30988 508 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 UBE2NP61088 152 aaKnown RBP10.64□□□□□ -0.71
CIITA-212ENST00000618207 ELP2Q6IA86 826 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 ASCL4Q6XD76 172 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 ACOT7LQ6ZUV0 252 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 SGPP2Q8IWX5 399 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 UBALD1Q8TB05 177 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 BCL2L2Q92843 193 aaPredicted RBP10.64□□□□□ -0.71
CIITA-212ENST00000618207 OR2J1Q9GZK6 312 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms