RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 DEGS2Q6QHC5 323 aa9.48□□□□□ -0.89
POLR2A-209ENST00000617998 SPNS2Q8IVW8 549 aa9.48□□□□□ -0.89
POLR2A-209ENST00000617998 CHCHD2Q9Y6H1 151 aaPredicted RBP9.48□□□□□ -0.89
POLR2A-209ENST00000617998 A0A1W2PS29 197 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 NAP1L6A6NFF2 107 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 M0QZK8 103 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 TRAF3IP2O43734 574 aaPredicted RBP9.47□□□□□ -0.89
POLR2A-209ENST00000617998 SUCLG1P53597 346 aaKnown RBP9.47□□□□□ -0.89
POLR2A-209ENST00000617998 LYZP61626 148 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 SMIM3Q9BZL3 60 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 SPRR3Q9UBC9 169 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 URGCP-MRPS24S4R325 110 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 KRASP01116 189 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 MVDP53602 400 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 AESQ08117 197 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 MLLT11Q13015 90 aaPredicted RBP9.47□□□□□ -0.89
POLR2A-209ENST00000617998 SPANXN5Q5MJ07 72 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 AKAP14Q86UN6 197 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 SLC25A22Q9H936 323 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 POM121CA8CG34 1229 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 KLF7O75840 302 aaPredicted RBP9.47□□□□□ -0.89
POLR2A-209ENST00000617998 ZNF85Q03923 595 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 FAM27BQ5VT28 67 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 SEC22AQ96IW7 307 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 METTL1Q9UBP6 276 aaKnown RBP9.47□□□□□ -0.89
POLR2A-209ENST00000617998 LOC102723996A0A087X1L8 192 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 SNRPBP14678 240 aaKnown RBP9.47□□□□□ -0.89
POLR2A-209ENST00000617998 MC5RP33032 325 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 ADIPOR1Q96A54 375 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 RBM14Q96PK6 669 aaKnown RBP9.47□□□□□ -0.89
POLR2A-209ENST00000617998 THSD7BQ9C0I4 1608 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 A0A0G2JLM5 398 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 A0A1W2PPE3 182 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 ARRDC5A6NEK1 342 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 WNT9BO14905 357 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 IGHA2P01877 340 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 CDK1P06493 297 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 DEFB113Q30KQ7 82 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 TMEM217Q8N7C4 229 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 OR8H1Q8NGG4 311 aa9.47□□□□□ -0.89
POLR2A-209ENST00000617998 STRAPQ9Y3F4 350 aaKnown RBP9.47□□□□□ -0.89
POLR2A-209ENST00000617998 hCG_38984A0A1B0GV85 526 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 FADS1O60427 444 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 BCL3P20749 454 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 GABARAPL2P60520 117 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 COL19A1Q14993 1142 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 OR10P1Q8NGE3 313 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 OR2G2Q8NGZ5 317 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 IGKV1-8A0A0C4DH67 115 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 PHYHD1Q5SRE7 291 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 LGALS14Q8TCE9 139 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 MAFIPQ8WZ33 124 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 TAS2R5Q9NYW4 299 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 MYO16Q9Y6X6 1858 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 DCTN6O00399 190 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 NEURL1O76050 574 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 HLA-AP01891 365 aaKnown RBP9.46□□□□□ -0.89
POLR2A-209ENST00000617998 MT-ND4P03905 459 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 TRGV3P03979 118 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 SEMG1P04279 462 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 ELP2Q6IA86 826 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 ZMAT4Q9H898 229 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 ZNF225Q9UK10 706 aa9.46□□□□□ -0.89
POLR2A-209ENST00000617998 LYNX1G3V0Z9 82 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 RNASEK-C17orf49H0YIS7 233 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 LYNX1P0DP58 116 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 MGST1P10620 155 aaKnown RBP9.46□□□□□ -0.9
POLR2A-209ENST00000617998 ZNF826PQ6ZT77 177 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 TMEM186Q96B77 213 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 OTOFQ9HC10 1997 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 J3KRW8 73 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 FABP7O15540 132 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 CHST1O43916 411 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 OR7C2O60412 319 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 IGHV1-2P23083 117 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 APCDD1LQ8NCL9 501 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 OR1S2Q8NGQ3 325 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 MRPL24Q96A35 216 aaKnown RBP9.46□□□□□ -0.9
POLR2A-209ENST00000617998 SLC29A1Q99808 456 aa9.46□□□□□ -0.9
POLR2A-209ENST00000617998 CCDC59Q9P031 241 aaKnown RBP9.46□□□□□ -0.9
POLR2A-209ENST00000617998 IGHV2OR16-5A0A0B4J2B6 119 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 XKRY2A2RUG3 117 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 LILRA1O75019 489 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 S100A9P06702 114 aaKnown RBP9.45□□□□□ -0.9
POLR2A-209ENST00000617998 OR52I1Q8NGK6 324 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 REG4Q9BYZ8 158 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 MGAMO43451 1857 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 SAP30O75446 220 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 ACKR3P25106 362 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 SHC1P29353 583 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 OR8I2Q8N0Y5 310 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 OR52N4Q8NGI2 321 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 OR56B4Q8NH76 319 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 MARS2Q96GW9 593 aaKnown RBP9.45□□□□□ -0.9
POLR2A-209ENST00000617998 ARV1Q9H2C2 271 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 SCPEP1Q9HB40 452 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 NBASA2RRP1 2371 aa9.45□□□□□ -0.9
POLR2A-209ENST00000617998 MAGEB4O15481 346 aaPredicted RBP9.45□□□□□ -0.9
POLR2A-209ENST00000617998 SS18L1O75177 396 aaPredicted RBP9.45□□□□□ -0.9
POLR2A-209ENST00000617998 RPS25P62851 125 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms