RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CPT2P23786 658 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 RPS27AP62979 156 aaKnown RBP12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 ESCO2Q56NI9 601 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 FGFRL1Q8N441 504 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZNF561Q8N587 486 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 ASCC1Q8N9N2 400 aaKnown RBP12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 TMEM185AQ8NFB2 350 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 Q96M66 194 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 BARHL1Q9BZE3 327 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 NDUFA13Q9P0J0 144 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZNF581Q9P0T4 197 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 FBLN5Q9UBX5 448 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 RAB22AQ9UL26 194 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 TMEM82A0PJX8 343 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 PHF1O43189 567 aaPredicted RBP12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 FCN3O75636 299 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 OR7C1O76099 320 aaPredicted RBP12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 GABRR1P24046 479 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 LMO1P25800 156 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 EFNB2P52799 333 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 GNB2P62879 340 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 TMEM249Q2WGJ8 235 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 LRRC10Q5BKY1 277 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 WDR25Q64LD2 544 aaPredicted RBP12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 OR5H6Q8NGV6 325 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 LGALS14Q8TCE9 139 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 ST8SIA4Q92187 359 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 SNX22Q96L94 193 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 URM1Q9BTM9 101 aaKnown RBP12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 SSBP3Q9BWW4 388 aaPredicted RBP12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 LPAR2Q9HBW0 351 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 SLC25A10Q9UBX3 287 aaPredicted RBP12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 CLN8Q9UBY8 286 aa12.98□□□□□ -0.33
PCDHGC3-204ENST00000617222 TRAV24A0A0B4J272 114 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 K7N7A8 449 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZNF701M0R085 212 aaPredicted RBP12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 SLC33A1O00400 549 aaPredicted RBP12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 PSPNO60542 156 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 TMEM127O75204 238 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZNF737O75373 536 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 TK1P04183 234 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 NDUFB7P17568 137 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZFP36P26651 326 aaKnown RBP12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 MPV17LQ2QL34 196 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 ATAD3CQ5T2N8 411 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 C17orf107Q6ZR85 190 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 LINC00596Q86U02 117 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 CHST4Q8NCG5 386 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 OR4S1Q8NGB4 309 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 C1orf159Q96HA4 380 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 COX4I2Q96KJ9 171 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 NICN1Q9BSH3 213 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 TM2D1Q9BX74 207 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 CHST6Q9GZX3 395 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 SHARPINQ9H0F6 387 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 LPAR5Q9H1C0 372 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 ABRACLQ9P1F3 81 aa12.97□□□□□ -0.33
PCDHGC3-204ENST00000617222 A0A0A6YYD4 124 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A10PA6NDY2 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A18PA6NE21 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A16PA6NEW6 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A20PA6NIJ5 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A8PA6NJQ4 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A7PA6NKC0 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A22PA8MWA6 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A12PA8MX19 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A5PA8MXJ8 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A23PA8MXZ1 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 HSPB6O14558 160 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FOXH1O75593 365 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A15PP0C7V4 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A13PP0C7W8 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A14PP0C7W9 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM90A24PP0C7X0 464 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 IGHV4-31P0DP07 118 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZNF182P17025 639 aaPredicted RBP12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 RAB6AP20340 208 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 VEGFCP49767 419 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 NPY4RP50391 375 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 LCN2P80188 198 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 GRK1Q15835 563 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 SIGIRRQ6IA17 410 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 BRICD5Q6PL45 260 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 BPIFB2Q8N4F0 458 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 SUMF2Q8NBJ7 301 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 OR5D13Q8NGL4 314 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 PPP1R35Q8TAP8 253 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 DYNC2LI1Q8TCX1 351 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 DGCR14Q96DF8 476 aaKnown RBP12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 MRI1Q9BV20 369 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM234AQ9H0X4 552 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 IFT22Q9H7X7 185 aa12.96□□□□□ -0.33
PCDHGC3-204ENST00000617222 KIAA1324LA8MWY0 1029 aaPredicted RBP12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 B4DSR2 109 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 SOCS1O15524 211 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 FUT3P21217 361 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 SOX6P35712 828 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 OR3A1P47881 315 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 GZMKP49863 264 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms