RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TIMM8AO60220 97 aaPredicted RBP6.63□□□□□ -1.35
NEK3-207ENST00000617054 ZNF780AO75290 641 aaPredicted RBP6.63□□□□□ -1.35
NEK3-207ENST00000617054 CNOT4O95628 575 aaKnown RBP6.63□□□□□ -1.35
NEK3-207ENST00000617054 KNG1P01042 644 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 HLA-AP01891 365 aaKnown RBP6.63□□□□□ -1.35
NEK3-207ENST00000617054 TRAPPC2P0DI81 140 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 TRAPPC2BP0DI82 140 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 CEACAM8P31997 349 aaPredicted RBP6.63□□□□□ -1.35
NEK3-207ENST00000617054 GNG3P63215 75 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 SSBP1Q04837 148 aaKnown RBP6.63□□□□□ -1.35
NEK3-207ENST00000617054 DHRS2Q13268 280 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 C20orf204Q6ZNR8 217 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 KCTD9Q7L273 389 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 HOGA1Q86XE5 327 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 MKXQ8IYA7 352 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 OR5T2Q8NGG2 359 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 SEC22AQ96IW7 307 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 GPHA2Q96T91 129 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 ZNF436Q9C0F3 470 aaPredicted RBP6.63□□□□□ -1.35
NEK3-207ENST00000617054 OR51I2Q9H344 312 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 DLL4Q9NR61 685 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 MGAT4AQ9UM21 535 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 MAP1AP78559 2803 aaPredicted RBP6.63□□□□□ -1.35
NEK3-207ENST00000617054 TRGV8A0A0C4DH27 118 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 FCGR3AP08637 254 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 RAG2P55895 527 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 FXYD4P59646 89 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 ARPC4P59998 168 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 NAAAQ02083 359 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 OR8G1Q15617 311 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 PNLIPRP3Q17RR3 467 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 IGSF11Q5DX21 431 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 AADACL3Q5VUY0 350 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 C11orf88Q6PI97 169 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 SLC22A25Q6T423 547 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 DPPA2Q7Z7J5 298 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 TCTE3Q8IZS6 198 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 TERB2Q8NHR7 220 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 CPNE2Q96FN4 548 aaPredicted RBP6.63□□□□□ -1.35
NEK3-207ENST00000617054 TMEM246Q9BRR3 403 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 CHMP1AQ9HD42 196 aaPredicted RBP6.63□□□□□ -1.35
NEK3-207ENST00000617054 OR14J1Q9UGF5 321 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 HSPB11Q9Y547 144 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 FAM25EA8MYX2 175 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 ATP6V1G2-DDX39BF2Z307 99 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 PDCD6O75340 191 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 GSTT2P0CG29 244 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 ANXA3P12429 323 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 FUT3P21217 361 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 NFYAP23511 347 aaPredicted RBP6.62□□□□□ -1.35
NEK3-207ENST00000617054 CCKARP32238 428 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 GZMKP49863 264 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 MEF2DQ14814 521 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 PPA1Q15181 289 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 SLC9A3R2Q15599 337 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 ZBTB37Q5TC79 503 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 LAMTOR1Q6IAA8 161 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 TMEM17Q86X19 198 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 CCDC36Q8IYA8 594 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 ZCCHC24Q8N2G6 241 aaKnown RBP6.62□□□□□ -1.35
NEK3-207ENST00000617054 PRR18Q8N4B5 295 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 RELL2Q8NC24 303 aaPredicted RBP6.62□□□□□ -1.35
NEK3-207ENST00000617054 OR5AP2Q8NGF4 316 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 CCDC107Q8WV48 283 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 TOMM40LQ969M1 308 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 MUCL1Q96DR8 90 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 PRRT1Q99946 306 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 ZNF2Q9BSG1 426 aaPredicted RBP6.62□□□□□ -1.35
NEK3-207ENST00000617054 C5orf66Q9H5L9 145 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 PURGQ9UJV8 347 aaKnown RBP6.62□□□□□ -1.35
NEK3-207ENST00000617054 MPC1Q9Y5U8 109 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 A6NLC8 198 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 SIRPB1O00241 398 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 KCNAB3O43448 404 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 SLC22A5O76082 557 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 IGLV1-44P01699 117 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 RAC2P15153 192 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 ZNF44P15621 663 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 IL13RA1P78552 427 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 LRRC37A5PQ49AS3 106 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 OVCH2Q7RTZ1 564 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 WFDC8Q8IUA0 241 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 ZBTB34Q8NCN2 500 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 SLC25A21Q9BQT8 299 aaPredicted RBP6.62□□□□□ -1.35
NEK3-207ENST00000617054 NUDT16L1Q9BRJ7 211 aaKnown RBP6.62□□□□□ -1.35
NEK3-207ENST00000617054 PPA2Q9H2U2 334 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 GPN1Q9HCN4 374 aaPredicted RBP6.62□□□□□ -1.35
NEK3-207ENST00000617054 TMEM100Q9NV29 134 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 PIPOXQ9P0Z9 390 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 ANXA10Q9UJ72 324 aa6.62□□□□□ -1.35
NEK3-207ENST00000617054 NOP16Q9Y3C1 178 aaKnown RBP6.62□□□□□ -1.35
NEK3-207ENST00000617054 MEIKINA0A087WXM9 373 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 G3V3Q6 166 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 C1QBP02746 253 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 PGAM2P15259 253 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 RCC1P18754 421 aaPredicted RBP6.61□□□□□ -1.35
NEK3-207ENST00000617054 GCH1P30793 250 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 FGF12P61328 243 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 ZNF573Q86YE8 665 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 FAM58AQ8N1B3 248 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms