RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 C12orf43Q96C57 262 aaKnown RBP12.36□□□□□ -0.43
UBXN1-218ENST00000616865 GAL3ST1Q99999 423 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 ZNF747Q9BV97 191 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 CST11Q9H112 138 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 WDR13Q9H1Z4 485 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 RBFOX1Q9NWB1 397 aaKnown RBP12.36□□□□□ -0.43
UBXN1-218ENST00000616865 IL36GQ9NZH8 169 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 NLKQ9UBE8 527 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 OPN4Q9UHM6 478 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 NKX6-3A6NJ46 265 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 HKR1P10072 659 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 SLC2A2P11168 524 aaPredicted RBP12.35□□□□□ -0.43
UBXN1-218ENST00000616865 GTF2F2P13984 249 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 GABRA2P47869 451 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 RORCP51449 518 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 CLDN12P56749 244 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 FOXL1Q12952 345 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 SPCS2Q15005 226 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 ZMYND11Q15326 602 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 DGUOKQ16854 277 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 CRIP3Q6Q6R5 217 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 SHISA2Q6UWI4 295 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 ASCL4Q6XD76 172 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 FAM90A1Q86YD7 464 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 OSR2Q8N2R0 312 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 SPICQ8N5J4 248 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 KCNG3Q8TAE7 436 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 FAM3DQ96BQ1 224 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 DGCR14Q96DF8 476 aaKnown RBP12.35□□□□□ -0.43
UBXN1-218ENST00000616865 BATF3Q9NR55 127 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 OR14J1Q9UGF5 321 aa12.35□□□□□ -0.43
UBXN1-218ENST00000616865 TRRAPQ9Y4A5 3859 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 WNK2Q9Y3S1 2297 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 A0A0G2JK05 382 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 OR2AT4A6NND4 320 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 ZNF701M0R085 212 aaPredicted RBP12.34□□□□□ -0.43
UBXN1-218ENST00000616865 NDUFA2O43678 99 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 MPIG6BO95866 241 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 KNG1P01042 644 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 IGHV2-70P01814 119 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 GYPAP02724 150 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 SFTPBP07988 381 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 CD37P11049 281 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 FPR2P25090 351 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 FGF12P61328 243 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 ERVK11-1P61568 191 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 LCN2P80188 198 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 HOXA4Q00056 320 aaPredicted RBP12.34□□□□□ -0.43
UBXN1-218ENST00000616865 SCN1BQ07699 218 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 TUSC1Q2TAM9 212 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 NR2C2APQ86WQ0 139 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 LYPD6Q86Y78 171 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 OR51D1Q8NGF3 324 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 OR5T2Q8NGG2 359 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 FAM46BQ96A09 425 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 SLC25A46Q96AG3 418 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 SEH1LQ96EE3 360 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 MRI1Q9BV20 369 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 RBM38Q9H0Z9 239 aaKnown RBP12.34□□□□□ -0.43
UBXN1-218ENST00000616865 BANF2Q9H503 90 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 LIN7BQ9HAP6 207 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 HMG20AQ9NP66 347 aa12.34□□□□□ -0.43
UBXN1-218ENST00000616865 ARHGAP32A7KAX9 2087 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 PPIAL4CA0A0B4J2A2 164 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 F8VVB4 439 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 F8VWA3 439 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 SH2D1BO14796 132 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 TMEM127O75204 238 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 MGMTP16455 207 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 C2orf76Q3KRA6 126 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 ZNF404Q494X3 552 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 SPIN3Q5JUX0 258 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 TEX36Q5VZQ5 186 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 ELP2Q6IA86 826 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 OR2W3Q7Z3T1 314 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 LRRC28Q86X40 367 aaPredicted RBP12.33□□□□□ -0.44
UBXN1-218ENST00000616865 AP3S1Q92572 193 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 SLC25A28Q96A46 364 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 MRPS24Q96EL2 167 aaKnown RBP12.33□□□□□ -0.44
UBXN1-218ENST00000616865 TMEM246Q9BRR3 403 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 URM1Q9BTM9 101 aaKnown RBP12.33□□□□□ -0.44
UBXN1-218ENST00000616865 TMEM59Q9BXS4 323 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 SELENOIQ9C0D9 397 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 TMEM165Q9HC07 324 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 HES4Q9HCC6 221 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 ST3GAL6Q9Y274 331 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 PKD1L1Q8TDX9 2849 aa12.33□□□□□ -0.44
UBXN1-218ENST00000616865 A0A0B4J203 849 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 RFPL4AA6NLU0 287 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 RFPL4AL1F8VTS6 287 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.32□□□□□ -0.44
UBXN1-218ENST00000616865 ADAM20O43506 726 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 FOXH1O75593 365 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 FSTL3O95633 263 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 VSIG8P0DPA2 414 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 PSG2P11465 335 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 SNRPBP14678 240 aaKnown RBP12.32□□□□□ -0.44
UBXN1-218ENST00000616865 RPS2P15880 293 aaKnown RBP12.32□□□□□ -0.44
UBXN1-218ENST00000616865 DUSP1P28562 367 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 PRDX2P32119 198 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms