RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 RAD51DO75771 328 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 APOBEC1P41238 236 aaKnown RBP19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 FOXK1P85037 733 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 ACACAQ13085 2346 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 OR2T2Q6IF00 324 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 NFAM1Q8NET5 270 aaPredicted RBP19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 THAP3Q8WTV1 239 aaPredicted RBP19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 ZNF700Q9H0M5 742 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 RAXQ9Y2V3 346 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 CRYM-AS1A6NIL9 109 aa19.11■□□□□ 0.65
POLR2J3-220ENST00000613744 CYC1P08574 325 aa19.11■□□□□ 0.65
POLR2J3-220ENST00000613744 SRP19P09132 144 aaKnown RBP19.11■□□□□ 0.65
POLR2J3-220ENST00000613744 SNU13P55769 128 aaKnown RBP19.11■□□□□ 0.65
POLR2J3-220ENST00000613744 NUTF2P61970 127 aaKnown RBP19.11■□□□□ 0.65
POLR2J3-220ENST00000613744 FAM89BQ8N5H3 189 aa19.11■□□□□ 0.65
POLR2J3-220ENST00000613744 APCDD1LQ8NCL9 501 aa19.11■□□□□ 0.65
POLR2J3-220ENST00000613744 HSPB1P04792 205 aaKnown RBP19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 PPP1CCP36873 323 aaKnown RBP19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 FHITP49789 147 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 NHLH2Q02577 135 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 HNF4GQ14541 408 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 JOSD1Q15040 202 aaPredicted RBP19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 AKR1C8PQ5T2L2 129 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 HLA-DQA1Q5Y7H0 255 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 KLHL24Q6TFL4 600 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 RTN4RL2Q86UN3 420 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 PACRGQ96M98 296 aaPredicted RBP19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 MRPL37Q9BZE1 423 aaKnown RBP19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 DECR2Q9NUI1 292 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 IGF2RP11717 2491 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 A8MWP6 167 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 UTS2O95399 124 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 RAB4AP20338 218 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 SULF2Q8IWU5 870 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 SPACA3Q8IXA5 215 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 SLC25A31Q9H0C2 315 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 NXF5Q9H1B4 397 aaKnown RBP19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 PRO1933Q9H354 126 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 MOB1AQ9H8S9 216 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 TMEM242Q9NWH2 141 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 PITPNC1Q9UKF7 332 aa19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 URB1O60287 2271 aaKnown RBP19.1■□□□□ 0.65
POLR2J3-220ENST00000613744 TRBV11-1A0A0K0K1C0 115 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 MBPP02686 304 aaPredicted RBP19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 FABP4P15090 132 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 ZNF20P17024 532 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 IL2RGP31785 369 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 ERVFRD-1P60508 538 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 DLK1P80370 383 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 UNQ6494/PRO21346Q6UXR6 183 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 TMEM104Q8NE00 496 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 FAM213BQ8TBF2 198 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 ARHGAP5-AS1Q96IT6 56 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 IMMP1LQ96LU5 166 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 WWTR1Q9GZV5 400 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 PBOV1Q9GZY1 135 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 HIPK2Q9H2X6 1198 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 ZNF727A8MUV8 499 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 FTCDNL1E5RQL4 147 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 CYB5BO43169 146 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 KNG1P01042 644 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 TRGC2P03986 189 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 SERPINA2P20848 420 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 Q0VFX4 171 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 CHRFAM7AQ494W8 412 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 C16orf47Q6ZP98 133 aaPredicted RBP19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 PRR22Q8IZ63 422 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 OR10G4Q8NGN3 311 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 MRPL24Q96A35 216 aaKnown RBP19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 ACTR3CQ9C0K3 210 aaPredicted RBP19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 DKK4Q9UBT3 224 aa19.09■□□□□ 0.65
POLR2J3-220ENST00000613744 CHD8Q9HCK8 2581 aa19.08■□□□□ 0.65
POLR2J3-220ENST00000613744 TRGC1P0CF51 173 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 RNF4P78317 190 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 ZNF429Q86V71 674 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 TGIF2LXQ8IUE1 241 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 C1orf87Q8N0U7 546 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 LRTM2Q8N967 370 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 ADIPOR1Q96A54 375 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 ZNF524Q96C55 264 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 NIPSNAP3BQ9BS92 247 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 OR10A2Q9H208 303 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 CACNA1CQ13936 2221 aa19.08■□□□□ 0.64
POLR2J3-220ENST00000613744 SERPINE3A8MV23 424 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 PLPP3O14495 311 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 NPIPB7O75200 414 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 RND2P52198 227 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 ZNF506Q5JVG8 444 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 GFI1BQ5VTD9 330 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 DPPA2Q7Z7J5 298 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 RARRES2Q99969 163 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 TGIF2-C20orf24A0A0A6YYL0 155 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 FOXI3A8MTJ6 420 aaPredicted RBP19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 SDCBPO00560 298 aaPredicted RBP19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 C1QL1O75973 258 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 MPZL1O95297 269 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 ZNF343Q6P1L6 599 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 OR5AS1Q8N127 324 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 SLC25A36Q96CQ1 311 aa19.07■□□□□ 0.64
POLR2J3-220ENST00000613744 BSCL2Q96G97 398 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms