RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	BLOC1S1	P78537	153 aa		11.18	□□□□□ -0.62
SMTN-222	ENST00000612341	SF3B5	Q9BWJ5	86 aa	Known RBP	11.18	□□□□□ -0.62
SMTN-222	ENST00000612341	ZNF442	Q9H7R0	627 aa		11.18	□□□□□ -0.62
SMTN-222	ENST00000612341	PLA2G3	Q9NZ20	509 aa		11.18	□□□□□ -0.62
SMTN-222	ENST00000612341	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.18	□□□□□ -0.62
SMTN-222	ENST00000612341	TIMM10B	Q9Y5J6	103 aa		11.18	□□□□□ -0.62
SMTN-222	ENST00000612341	TMEM265	A0A087WTH1	108 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	C3orf80	F5H4A9	247 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	XRCC2	O43543	280 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	CST2	P09228	141 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	JMJD7	P0C870	316 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	FCGR2C	P31995	323 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	NPBWR2	P48146	333 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	ZNF133	P52736	654 aa	Predicted RBP	11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	FOXG1	P55316	489 aa	Predicted RBP	11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	GGNBP1	Q5YKI7	109 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	LINC00696	Q6ZRV3	163 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	CALHM1	Q8IU99	346 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	C1orf210	Q8IVY1	113 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	OR11L1	Q8NGX0	322 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	SPSB1	Q96BD6	273 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	GPHA2	Q96T91	129 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	NCKAP5	O14513	1909 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	TRBV6-7	A0A0A0MS04	114 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	FARS2	O95363	451 aa	Known RBP	11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	HLA-H	P01893	362 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	CYC1	P08574	325 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	FCGR3A	P08637	254 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	OR5AC1	P0C628	307 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	FAM3A	P98173	230 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	SLC25A26	Q70HW3	274 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	GPR35	Q9HC97	309 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	SLC7A11	Q9UPY5	501 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	TMEM218	A2RU14	115 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341		F8VVB4	439 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341		F8VWA3	439 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	MRPL33	O75394	65 aa	Known RBP	11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	ZNF728	P0DKX0	622 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	C3AR1	Q16581	482 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	AVPI1	Q5T686	147 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	PUSL1	Q8N0Z8	303 aa	Known RBP	11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	OSR2	Q8N2R0	312 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	PRR18	Q8N4B5	295 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	CPEB3	Q8NE35	698 aa	Known RBP	11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	SLC30A7	Q8NEW0	376 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	CPT1C	Q8TCG5	803 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	MISP3	Q96FF7	219 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	SEBOX	Q9HB31	216 aa	Predicted RBP	11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	TAF9B	Q9HBM6	251 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	WASF3	Q9UPY6	502 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	MEMO1	Q9Y316	297 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341	DMRT1	Q9Y5R6	373 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341		R4GN57	208 aa		11.17	□□□□□ -0.62
SMTN-222	ENST00000612341		K7EPK0	472 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	IFNA21	P01568	189 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	ZNF708	P17019	499 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	ADCYAP1	P18509	176 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	DUSP1	P28562	367 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	SMCO1	Q147U7	214 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	MEX3B	Q6ZN04	569 aa	Known RBP	11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	FAM71E2	Q8N5Q1	922 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	KCNE4	Q8WWG9	221 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	ARL11	Q969Q4	196 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	SLC5A7	Q9GZV3	580 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	BDP1	A6H8Y1	2624 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	CNOT1	A5YKK6	2376 aa	Known RBP	11.16	□□□□□ -0.62
SMTN-222	ENST00000612341		A0A1W2PPE3	182 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	SLC33A1	O00400	549 aa	Predicted RBP	11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	MED6	O75586	246 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	PET100	P0DJ07	73 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	RPL12	P30050	165 aa	Known RBP	11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	FABP9	Q0Z7S8	132 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	ARL6IP1	Q15041	203 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	LYZL2	Q7Z4W2	148 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	VASH2	Q86V25	355 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	GUCD1	Q96NT3	240 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	SIGLEC12	Q96PQ1	595 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	NECAP2	Q9NVZ3	263 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	TECTA	O75443	2155 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	MED13	Q9UHV7	2174 aa		11.16	□□□□□ -0.62
SMTN-222	ENST00000612341	MED19	A0JLT2	244 aa	Predicted RBP	11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	MEX3A	A1L020	520 aa	Known RBP	11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	OR6C6	A6NF89	314 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	TDGF1	P13385	188 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	CHAT	P28329	748 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	SPEM2	Q0P670	501 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	PDZK1IP1	Q13113	114 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	OR4A4P	Q8NGN8	299 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	STOML3	Q8TAV4	291 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	SLC7A10	Q9NS82	523 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	HKR1	P10072	659 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	ASCL1	P50553	236 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	HABP2	Q14520	560 aa	Predicted RBP	11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	LHFPL2	Q6ZUX7	228 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	TUSC5	Q8IXB3	177 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	ZNF611	Q8N823	705 aa		11.15	□□□□□ -0.62
SMTN-222	ENST00000612341	CNTNAP3B	Q96NU0	1288 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms