RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TBX15Q96SF7 602 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 NMNAT3Q96T66 252 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CMKLR1Q99788 373 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 NKX3-1Q99801 234 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 GABRG3Q99928 467 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ALKBH7Q9BT30 221 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 MAP1LC3BQ9GZQ8 125 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 R3HDMLQ9H3Y0 253 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CHODLQ9H9P2 273 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ELL3Q9HB65 397 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 GRHPRQ9UBQ7 328 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 B4GALT6Q9UBX8 382 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 RNF150Q9ULK6 438 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 HSF4Q9ULV5 492 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ABT1Q9ULW3 272 aaKnown RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 HHLA2Q9UM44 414 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 C19orf53Q9UNZ5 99 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 DHDHQ9UQ10 334 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ST3GAL6Q9Y274 331 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 WIPI2Q9Y4P8 454 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF780BQ9Y6R6 833 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 KIAA1549LQ6ZVL6 1849 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 DOCK9Q9BZ29 2069 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 COL4A5P29400 1685 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 TRAV9-1A0A075B6T8 112 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 IGHV2OR16-5A0A0B4J2B6 119 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 A0A1W2PPV9 198 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CRYM-AS1A6NIL9 109 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 GRXCR1A8MXD5 290 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 GPR89AB7ZAQ6 455 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM250H0YL14 139 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 J3QR06 171 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 GRM6O15303 877 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 ST8SIA3O43173 380 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 HOXA3O43365 443 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 COCHO43405 550 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 PQBP1O60828 265 aaKnown RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 RAMP3O60896 148 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 PITX3O75364 302 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR2J2O76002 312 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 NKX2-2O95096 273 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 TNFSF15O95150 251 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 VENTXO95231 258 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 GJB5O95377 273 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CDS2O95674 445 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 SCGB1D1O95968 90 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 NGFRP08138 427 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CTXN2P0C2S0 81 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR4Q2P0C623 313 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 GPR89BP0CG08 455 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 SCGB1A1P11684 91 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 SERPINA2P20848 420 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 FUT3P21217 361 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 GLRA1P23415 457 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 DUSP1P28562 367 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 TLX1P31314 330 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CCKBRP32239 447 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 OTX1P32242 354 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 SFTPDP35247 375 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CEACAM3P40198 252 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CTRLP40313 264 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 BLKP51451 505 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CCR5P51681 352 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CNN1P51911 297 aaKnown RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CEBPGP53567 150 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 UCP3P55916 312 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 YPEL3P61236 119 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 RPL15P61313 204 aaKnown RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 RAB11AP62491 216 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 RPL23AP62750 156 aaKnown RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 DUSP2Q05923 314 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 PRDX1Q06830 199 aaKnown RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 BAXQ07812 192 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 SLC9A3R2Q15599 337 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF141Q15928 474 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM183BQ1AE95 376 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 TCTN1Q2MV58 587 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 MPV17LQ2QL34 196 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 MAJINQ3KP22 176 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CTXN3Q4LDR2 81 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 TPTE2P1Q5T6R2 138 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 WDR25Q64LD2 544 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 FBXO42Q6P3S6 717 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 KCTD18Q6PI47 426 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CBLN3Q6UW01 205 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 PLXDC2Q6UX71 529 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 TOMM20LQ6UXN7 152 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF793Q6ZN11 406 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CYP2G1PQ6ZSU1 146 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 SLC24A5Q71RS6 500 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 ERN2Q76MJ5 926 aaKnown RBP3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 HSD11B1LQ7Z5J1 315 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 PLXDC1Q8IUK5 500 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF440Q8IYI8 595 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 SLC22A24Q8N4F4 322 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 CYB561D1Q8N8Q1 229 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR4B1Q8NGF8 309 aa3.52□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR5L1Q8NGL2 311 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms