RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 ODF3BA8MYP8 253 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 SIRPB1O00241 398 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 SULT1B1O43704 296 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 ALX3O95076 343 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 OR3A1P47881 315 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 ZNF626Q68DY1 528 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 LIAT1Q6ZQX7 453 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 PARP16Q8N5Y8 322 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 OR11H6Q8NGC7 330 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 OR4C13Q8NGP0 309 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 JAM3Q9BX67 310 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 FBLN5Q9UBX5 448 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 VWFP04275 2813 aa14.68□□□□□ -0.06
CCDC12-208ENST00000603885 WNK1Q9H4A3 2382 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 VGLL3A8MV65 326 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 WBP4O75554 376 aaKnown RBP14.67□□□□□ -0.06
CCDC12-208ENST00000603885 OR2H2O95918 312 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 LIMS3P0CW19 117 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 LIMS4P0CW20 117 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 ERP29P30040 261 aaKnown RBP14.67□□□□□ -0.06
CCDC12-208ENST00000603885 P2RX3P56373 397 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 DYNC1I2Q13409 638 aaKnown RBP14.67□□□□□ -0.06
CCDC12-208ENST00000603885 KISS1Q15726 138 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 SMN1Q16637 294 aaKnown RBP14.67□□□□□ -0.06
CCDC12-208ENST00000603885 RNF144BQ7Z419 303 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 TRAPPC6BQ86SZ2 158 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 MALSU1Q96EH3 234 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 RANBP3Q9H6Z4 567 aaPredicted RBP14.67□□□□□ -0.06
CCDC12-208ENST00000603885 FGF20Q9NP95 211 aaPredicted RBP14.67□□□□□ -0.06
CCDC12-208ENST00000603885 UBE2J1Q9Y385 318 aaPredicted RBP14.67□□□□□ -0.06
CCDC12-208ENST00000603885 SESN1Q9Y6P5 492 aa14.67□□□□□ -0.06
CCDC12-208ENST00000603885 IRGMA1A4Y4 181 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 FUOMA2VDF0 154 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 TMEM225BP0DP42 221 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 DCKP27707 260 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 PLA1AQ53H76 456 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 ASPHD2Q6ICH7 369 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 CRIP3Q6Q6R5 217 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 DYNAPQ8N1N2 210 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 PIFOQ8TCI5 191 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 CPNE2Q96FN4 548 aaPredicted RBP14.66□□□□□ -0.06
CCDC12-208ENST00000603885 NPFFR1Q9GZQ6 430 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 ABCB10Q9NRK6 738 aa14.66□□□□□ -0.06
CCDC12-208ENST00000603885 TRGV10A0A0A0MS01 117 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 ZNF44P15621 663 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 RAB3AP20336 220 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 LMO1P25800 156 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 KIR2DS4P43632 304 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 GTF2A1P52655 376 aaPredicted RBP14.65□□□□□ -0.06
CCDC12-208ENST00000603885 ZP1P60852 638 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 SCN1BQ07699 218 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 FAM189A2Q15884 450 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 SSX2Q16385 188 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 LRRC36Q1X8D7 754 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 CCDC58Q4VC31 144 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 MINOS1Q5TGZ0 78 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 ZNF691Q5VV52 312 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 RPL22L1Q6P5R6 122 aaKnown RBP14.65□□□□□ -0.06
CCDC12-208ENST00000603885 C11orf88Q6PI97 169 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 TMPRSS11AQ6ZMR5 421 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 DTX3Q8N9I9 347 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 CHST4Q8NCG5 386 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 CNIH3Q8TBE1 160 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 RPS4Y2Q8TD47 263 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 CYGBQ8WWM9 190 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 TMEM133Q9H2Q1 129 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 MMP27Q9H306 513 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 GAL3ST2Q9H3Q3 398 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 C8orf4Q9NR00 106 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 MINOS1-NBL1R4GNA1 71 aa14.65□□□□□ -0.06
CCDC12-208ENST00000603885 IGHV2-26A0A0B4J1V2 119 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 MAGEB3O15480 346 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 CHST1O43916 411 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 CLIC3O95833 236 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 CD2P06729 351 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 SOX2P48431 317 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 MTNR1BP49286 362 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 ETV1P50549 477 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 IL18R1Q13478 541 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 CDK5R1Q15078 307 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 TTC23Q5W5X9 447 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 OR2T6Q8NHC8 308 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 GPR148Q8TDV2 347 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 CDCA4Q9BXL8 241 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 CLEC7AQ9BXN2 247 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 PITPNC1Q9UKF7 332 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 TCF19Q9Y242 345 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 SIGLEC9Q9Y336 463 aa14.64□□□□□ -0.07
CCDC12-208ENST00000603885 A0A0G2JK05 382 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 WIPF1O43516 503 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 CSN2P05814 226 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 MYL12AP19105 171 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 RAB13P51153 203 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 EFNB2P52799 333 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 AESQ08117 197 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 LDLRAD2Q5SZI1 272 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 OR52W1Q6IF63 320 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 Q6P435 159 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 PACRGLQ8N7B6 248 aa14.63□□□□□ -0.07
CCDC12-208ENST00000603885 SETD9Q8NE22 299 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms