RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 NUDCD2Q8WVJ2 157 aa12.15□□□□□ -0.46
ZNF548-212ENST00000602086 DPAGT1Q9H3H5 408 aa12.15□□□□□ -0.46
ZNF548-212ENST00000602086 RIMS4Q9H426 269 aaPredicted RBP12.15□□□□□ -0.46
ZNF548-212ENST00000602086 IFT46Q9NQC8 304 aa12.15□□□□□ -0.46
ZNF548-212ENST00000602086 CISD1Q9NZ45 108 aaKnown RBP12.15□□□□□ -0.46
ZNF548-212ENST00000602086 TREM2Q9NZC2 230 aa12.15□□□□□ -0.46
ZNF548-212ENST00000602086 GLS2Q9UI32 602 aa12.15□□□□□ -0.46
ZNF548-212ENST00000602086 ELF5Q9UKW6 265 aaPredicted RBP12.15□□□□□ -0.46
ZNF548-212ENST00000602086 IFNL4K9M1U5 179 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 SPRY3O43610 288 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 CLDN1O95832 211 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 LHBP01229 141 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 LMO1P25800 156 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 RAG2P55895 527 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 RBM39Q14498 530 aaKnown RBP12.14□□□□□ -0.47
ZNF548-212ENST00000602086 ZMYND11Q15326 602 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 MPPED2Q15777 294 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 SWI5Q1ZZU3 235 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 MST1LQ2TV78 715 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 SMIM21Q3B7S5 101 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 NKAPLQ5M9Q1 402 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 STEAP1BQ6NZ63 245 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 Q6P435 159 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 PLET1Q6UQ28 207 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 ACP7Q6ZNF0 438 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 Q6ZS49 121 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 LILRB1Q8NHL6 650 aaPredicted RBP12.14□□□□□ -0.47
ZNF548-212ENST00000602086 ITLN1Q8WWA0 313 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 FBXW5Q969U6 566 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 CREB3L1Q96BA8 519 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 ZNF488Q96MN9 340 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 HS3ST6Q96QI5 342 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 SULT4A1Q9BR01 284 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 EGLN1Q9GZT9 426 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 FAIMQ9NVQ4 179 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 C1orf123Q9NWV4 160 aa12.14□□□□□ -0.47
ZNF548-212ENST00000602086 KLF2Q9Y5W3 355 aaPredicted RBP12.14□□□□□ -0.47
ZNF548-212ENST00000602086 CHD3Q12873 2000 aaKnown RBP12.13□□□□□ -0.47
ZNF548-212ENST00000602086 TRBV6-6A0A0A6YYG2 114 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 ZNF736B4DX44 427 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-212ENST00000602086 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 SH2D1BO14796 132 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 SSX4O60224 188 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 SPNP16150 400 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 GLRA1P23415 457 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 MDH2P40926 338 aaKnown RBP12.13□□□□□ -0.47
ZNF548-212ENST00000602086 BTG1P62324 171 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 MRPS15P82914 257 aaKnown RBP12.13□□□□□ -0.47
ZNF548-212ENST00000602086 IKZF1Q13422 519 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 SNTB1Q13884 538 aaKnown RBP12.13□□□□□ -0.47
ZNF548-212ENST00000602086 OR4C16Q8NGL9 310 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 PIK3IP1Q96FE7 263 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 CMSS1Q9BQ75 279 aaKnown RBP12.13□□□□□ -0.47
ZNF548-212ENST00000602086 MARVELD1Q9BSK0 173 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 FAAP24Q9BTP7 215 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 CACNG6Q9BXT2 260 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 SLC2A8Q9NY64 477 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 AK3Q9UIJ7 227 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 NUBP2Q9Y5Y2 271 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 NPTNQ9Y639 398 aa12.13□□□□□ -0.47
ZNF548-212ENST00000602086 TEX15Q9BXT5 2789 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 A0A1B0GVG6 124 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 H7C1Q1 480 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 DEGS1O15121 323 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 RAB3DO95716 219 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 NAPSAO96009 420 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 PLAUP00749 431 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 CD3DP04234 171 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 KCNJ3P48549 501 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 TAS2R46P59540 309 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 VAX1Q5SQQ9 334 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 ATAD3CQ5T2N8 411 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 ZNF826PQ6ZT77 177 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 RTN4RL2Q86UN3 420 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 OR11L1Q8NGX0 322 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 LRRC29Q8WV35 223 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 HPS1Q92902 700 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 GCM1Q9NP62 436 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 C12orf4Q9NQ89 552 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 UFSP2Q9NUQ7 469 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 NLKQ9UBE8 527 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 RNF7Q9UBF6 113 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 IL36RNQ9UBH0 155 aa12.12□□□□□ -0.47
ZNF548-212ENST00000602086 TRAV24A0A0B4J272 114 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 hCG_1807616A0A1W2PRN6 198 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 MEIS3P1A6NDR6 274 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 DISC1C4P0D8 188 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 MT-ND4P03905 459 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 TCRBP04435 133 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 GIFP27352 417 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 PPOXP50336 477 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 PAX5Q02548 391 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 RNASE10Q5GAN6 216 aaKnown RBP12.11□□□□□ -0.47
ZNF548-212ENST00000602086 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 MOGAT3Q86VF5 341 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 GAPTQ8N292 157 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 MUC15Q8N387 334 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 GCSAMQ8N6F7 178 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 GVQW1Q8N7I0 195 aa12.11□□□□□ -0.47
ZNF548-212ENST00000602086 SUMF2Q8NBJ7 301 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms