RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 HLA-DQB1P01920 261 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 PRDX4Q13162 271 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 MSI2Q96DH6 328 aaKnown RBP9.68□□□□□ -0.86
ZNF558-207ENST00000601372 MRPS24Q96EL2 167 aaKnown RBP9.68□□□□□ -0.86
ZNF558-207ENST00000601372 BRWD1Q9NSI6 2320 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 ADAM10O14672 748 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 OR5AC1P0C628 307 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 ZNF816Q0VGE8 651 aaPredicted RBP9.68□□□□□ -0.86
ZNF558-207ENST00000601372 PDLIM3Q53GG5 364 aaPredicted RBP9.68□□□□□ -0.86
ZNF558-207ENST00000601372 Q5BKY6 102 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 CLRN3Q8NCR9 226 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 OR11H4Q8NGC9 324 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 RGP1Q92546 391 aaPredicted RBP9.68□□□□□ -0.86
ZNF558-207ENST00000601372 OR8B3Q8NGG8 313 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 LINC01560Q8TB33 94 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 OR8B2Q96RD0 313 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 OPN4Q9UHM6 478 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 NUP210Q8TEM1 1887 aaPredicted RBP9.68□□□□□ -0.86
ZNF558-207ENST00000601372 PTPRDP23468 1912 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 C17orf112F2Z3M2 114 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 PIN1P1O15428 100 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 RECKO95980 971 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 HBE1P02100 147 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 FLI1Q01543 452 aaPredicted RBP9.68□□□□□ -0.86
ZNF558-207ENST00000601372 WDSUB1Q8N9V3 476 aa9.68□□□□□ -0.86
ZNF558-207ENST00000601372 NCBP2LA6PVI3 153 aaKnown RBP9.67□□□□□ -0.86
ZNF558-207ENST00000601372 HMSDA8MTL9 139 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 MGAT2Q10469 447 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 CLEC12BQ2HXU8 276 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 INO80CQ6PI98 192 aaPredicted RBP9.67□□□□□ -0.86
ZNF558-207ENST00000601372 CLEC18BQ6UXF7 455 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 ADPRHL1Q8NDY3 354 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 OR5M8Q8NGP6 311 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 SLC25A38Q96DW6 304 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 DOCK8Q8NF50 2099 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 OR8U8P0C7N1 319 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 ADRA2CP18825 462 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 GPR12P47775 334 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 RAB31Q13636 194 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 SMUG1Q53HV7 270 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 MOB3BQ86TA1 216 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 PLPPR2Q96GM1 343 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 GHITMQ9H3K2 345 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 PLEKHF2Q9H8W4 249 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 GAB2Q9UQC2 676 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 CACNA1IQ9P0X4 2223 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 TXNDC12O95881 172 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 MPPED2Q15777 294 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 ASB13Q8WXK3 278 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 TMEM68Q96MH6 324 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 HDHD3Q9BSH5 251 aaPredicted RBP9.67□□□□□ -0.86
ZNF558-207ENST00000601372 MMP26Q9NRE1 261 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 TO15178 435 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 GNG10P50151 68 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 C4orf17Q53FE4 359 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 C1QTNF12Q5T7M4 302 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 GGNBP1Q5YKI7 109 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 H2BFWTQ7Z2G1 175 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 TMEM104Q8NE00 496 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 UBL7Q96S82 380 aaPredicted RBP9.67□□□□□ -0.86
ZNF558-207ENST00000601372 RAB18Q9NP72 206 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 RYDENQ9NUL5 291 aaKnown RBP9.67□□□□□ -0.86
ZNF558-207ENST00000601372 TMEM229AB2RXF0 380 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 ADAM20O43506 726 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 KIAA0141Q14154 515 aaPredicted RBP9.67□□□□□ -0.86
ZNF558-207ENST00000601372 HIST2H3AQ71DI3 136 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 MSRB2Q9Y3D2 182 aa9.67□□□□□ -0.86
ZNF558-207ENST00000601372 A0A1W2PRD5 423 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 A0A1W2PRF3 423 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 A0A1W2PRM7 423 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 NBL1P41271 181 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 SCAND1P57086 179 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 ARRDC1Q8N5I2 433 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 RPS4Y2Q8TD47 263 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 PSENENQ9NZ42 101 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 KIR2DS1A0A191URI9 304 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 TMPRSS2O15393 492 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 DUS4LO95620 317 aaKnown RBP9.66□□□□□ -0.86
ZNF558-207ENST00000601372 SCGB1D1O95968 90 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 CST2P09228 141 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 KIR2DS4P43632 304 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 KIR2DS1Q14954 304 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 SSX2Q16385 188 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 BVESQ8NE79 360 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 IGKV1D-42A0A075B6H8 117 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 AQP7O14520 342 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 ZNF485Q8NCK3 441 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 LINC00862A6NCI5 91 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 SMAD7O15105 426 aaKnown RBP9.66□□□□□ -0.86
ZNF558-207ENST00000601372 CELA3AP09093 270 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 SRSF6Q13247 344 aaKnown RBP9.66□□□□□ -0.86
ZNF558-207ENST00000601372 RPL7L1Q6DKI1 246 aaKnown RBP9.66□□□□□ -0.86
ZNF558-207ENST00000601372 SHISA5Q8N114 240 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 HPSE2Q8WWQ2 592 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 PP6455Q8WZ26 134 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 RIMS4Q9H426 269 aaPredicted RBP9.66□□□□□ -0.86
ZNF558-207ENST00000601372 PLEKHA2Q9HB19 425 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 TMEM38BQ9NVV0 291 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 UPK3AO75631 287 aa9.66□□□□□ -0.86
ZNF558-207ENST00000601372 MT-CO2P00403 227 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms