RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 RAB40AQ8WXH6 277 aa15.05■□□□□ -0
LIG1-216ENST00000598938 CHCHD6Q9BRQ6 235 aa15.05■□□□□ -0
LIG1-216ENST00000598938 C19orf24Q9BVV8 132 aa15.05■□□□□ -0
LIG1-216ENST00000598938 SHARPINQ9H0F6 387 aa15.05■□□□□ -0
LIG1-216ENST00000598938 FAM234AQ9H0X4 552 aa15.05■□□□□ -0
LIG1-216ENST00000598938 PCDHB16Q9NRJ7 776 aa15.05■□□□□ -0
LIG1-216ENST00000598938 GHRLQ9UBU3 117 aa15.05■□□□□ -0
LIG1-216ENST00000598938 GLS2Q9UI32 602 aa15.05■□□□□ -0
LIG1-216ENST00000598938 MALRD1Q5VYJ5 2156 aa15.04■□□□□ -0
LIG1-216ENST00000598938 IGHV2-70DA0A0C4DH43 119 aa15.04■□□□□ -0
LIG1-216ENST00000598938 K7N7A8 449 aa15.04■□□□□ -0
LIG1-216ENST00000598938 SLC17A2O00624 439 aa15.04■□□□□ -0
LIG1-216ENST00000598938 PDCD5O14737 125 aa15.04■□□□□ -0
LIG1-216ENST00000598938 SH2D1BO14796 132 aa15.04■□□□□ -0
LIG1-216ENST00000598938 ECDO95905 644 aaPredicted RBP15.04■□□□□ -0
LIG1-216ENST00000598938 CSTBP04080 98 aaKnown RBP15.04■□□□□ -0
LIG1-216ENST00000598938 UBBP0CG47 229 aa15.04■□□□□ -0
LIG1-216ENST00000598938 SERPINA2P20848 420 aa15.04■□□□□ -0
LIG1-216ENST00000598938 HTR2CP28335 458 aa15.04■□□□□ -0
LIG1-216ENST00000598938 PSMD7P51665 324 aa15.04■□□□□ -0
LIG1-216ENST00000598938 IL13RA2Q14627 380 aa15.04■□□□□ -0
LIG1-216ENST00000598938 PIGYQ3MUY2 71 aa15.04■□□□□ -0
LIG1-216ENST00000598938 TIMM50Q3ZCQ8 353 aa15.04■□□□□ -0
LIG1-216ENST00000598938 SLC22A6Q4U2R8 563 aa15.04■□□□□ -0
LIG1-216ENST00000598938 DCAF12L2Q5VW00 463 aa15.04■□□□□ -0
LIG1-216ENST00000598938 Q6P435 159 aa15.04■□□□□ -0
LIG1-216ENST00000598938 GDPGP1Q6ZNW5 385 aa15.04■□□□□ -0
LIG1-216ENST00000598938 BTN2A1Q7KYR7 527 aa15.04■□□□□ -0
LIG1-216ENST00000598938 SLC25A28Q96A46 364 aa15.04■□□□□ -0
LIG1-216ENST00000598938 INSIG2Q9Y5U4 225 aa15.04■□□□□ -0
LIG1-216ENST00000598938 V9GY05 133 aa15.04■□□□□ -0
LIG1-216ENST00000598938 SVEP1Q4LDE5 3571 aa15.04■□□□□ -0
LIG1-216ENST00000598938 A0A0G2JMP0 313 aa15.03■□□□□ -0
LIG1-216ENST00000598938 LOC100506127A0A0U1RQW1 187 aa15.03■□□□□ -0
LIG1-216ENST00000598938 A0A0X1KG70 313 aa15.03■□□□□ -0
LIG1-216ENST00000598938 KIR2DS1A0A191URI9 304 aa15.03■□□□□ -0
LIG1-216ENST00000598938 A0A1W2PP11 408 aa15.03■□□□□ -0
LIG1-216ENST00000598938 TMEM82A0PJX8 343 aa15.03■□□□□ -0
LIG1-216ENST00000598938 J3QLI3 93 aa15.03■□□□□ -0
LIG1-216ENST00000598938 OR2H2O95918 312 aa15.03■□□□□ -0
LIG1-216ENST00000598938 TK1P04183 234 aa15.03■□□□□ -0
LIG1-216ENST00000598938 TFAP2AP05549 437 aa15.03■□□□□ -0
LIG1-216ENST00000598938 RAB3BP20337 219 aa15.03■□□□□ -0
LIG1-216ENST00000598938 LMO1P25800 156 aa15.03■□□□□ -0
LIG1-216ENST00000598938 ALDH3B2P48448 385 aa15.03■□□□□ -0
LIG1-216ENST00000598938 RBM11P57052 281 aaKnown RBP15.03■□□□□ -0
LIG1-216ENST00000598938 C17orf107Q6ZR85 190 aa15.03■□□□□ -0
LIG1-216ENST00000598938 ASCC1Q8N9N2 400 aaKnown RBP15.03■□□□□ -0
LIG1-216ENST00000598938 LY6G5BQ8NDX9 201 aa15.03■□□□□ -0
LIG1-216ENST00000598938 OR4M2Q8NGB6 313 aa15.03■□□□□ -0
LIG1-216ENST00000598938 MRPS24Q96EL2 167 aaKnown RBP15.03■□□□□ -0
LIG1-216ENST00000598938 SNX22Q96L94 193 aa15.03■□□□□ -0
LIG1-216ENST00000598938 KCTD7Q96MP8 289 aa15.03■□□□□ -0
LIG1-216ENST00000598938 NUDT16L1Q9BRJ7 211 aaKnown RBP15.03■□□□□ -0
LIG1-216ENST00000598938 DCTN5Q9BTE1 182 aa15.03■□□□□ -0
LIG1-216ENST00000598938 CENPOQ9BU64 300 aa15.03■□□□□ -0
LIG1-216ENST00000598938 RPUSD1Q9UJJ7 312 aaKnown RBP15.03■□□□□ -0
LIG1-216ENST00000598938 ST3GAL6Q9Y274 331 aa15.03■□□□□ -0
LIG1-216ENST00000598938 ENSAO43768 121 aaKnown RBP15.02■□□□□ -0
LIG1-216ENST00000598938 PSPNO60542 156 aa15.02■□□□□ -0
LIG1-216ENST00000598938 GTF2F2P13984 249 aa15.02■□□□□ -0
LIG1-216ENST00000598938 NDUFB7P17568 137 aa15.02■□□□□ -0
LIG1-216ENST00000598938 CFPP27918 469 aa15.02■□□□□ -0
LIG1-216ENST00000598938 CAPZA1P52907 286 aa15.02■□□□□ -0
LIG1-216ENST00000598938 OR10A3P58181 314 aa15.02■□□□□ -0
LIG1-216ENST00000598938 CR1LQ2VPA4 569 aa15.02■□□□□ -0
LIG1-216ENST00000598938 TPRA1Q86W33 373 aa15.02■□□□□ -0
LIG1-216ENST00000598938 CHST4Q8NCG5 386 aa15.02■□□□□ -0
LIG1-216ENST00000598938 C8orf46Q8TAG6 207 aa15.02■□□□□ -0
LIG1-216ENST00000598938 TMPRSS13Q9BYE2 586 aa15.02■□□□□ -0
LIG1-216ENST00000598938 RNF167Q9H6Y7 350 aa15.02■□□□□ -0
LIG1-216ENST00000598938 PLGRKTQ9HBL7 147 aa15.02■□□□□ -0
LIG1-216ENST00000598938 SIRPB1O00241 398 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 AIREO43918 545 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 BPNT1O95861 308 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 ZNF44P15621 663 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 SRD5A1P18405 259 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 GABRR1P24046 479 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 PAX8Q06710 450 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 RAB11BQ15907 218 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 FAHD2BQ6P2I3 314 aaPredicted RBP15.01□□□□□ -0.01
LIG1-216ENST00000598938 BTNL3Q6UXE8 466 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 LINC00596Q86U02 117 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 NR2C2APQ86WQ0 139 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 OR8H2Q8N162 312 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 TMEM104Q8NE00 496 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 OR5D13Q8NGL4 314 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 H1FXQ92522 213 aaKnown RBP15.01□□□□□ -0.01
LIG1-216ENST00000598938 FAHD2AQ96GK7 314 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 DMRTB1Q96MA1 342 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 FUNDC2Q9BWH2 189 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 CST11Q9H112 138 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 IFT22Q9H7X7 185 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 ARHGAP32A7KAX9 2087 aa15.01□□□□□ -0.01
LIG1-216ENST00000598938 TRBV23-1A0A0A0MS06 115 aa15□□□□□ -0.01
LIG1-216ENST00000598938 A0A0G2JK05 382 aa15□□□□□ -0.01
LIG1-216ENST00000598938 IFITM5A6NNB3 132 aa15□□□□□ -0.01
LIG1-216ENST00000598938 SLC33A1O00400 549 aaPredicted RBP15□□□□□ -0.01
LIG1-216ENST00000598938 GEMIN2O14893 280 aaKnown RBP15□□□□□ -0.01
LIG1-216ENST00000598938 DEGS1O15121 323 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms