RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 HCKP08631 526 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 ZNF93P35789 620 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 SERPINB10P48595 397 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 GPM6AP51674 278 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 ATP1B3P54709 279 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 MTCP1P56278 107 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 OR10A3P58181 314 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 ZP1P60852 638 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 ZMYND11Q15326 602 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 DDI2Q5TDH0 399 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 GLT8D1Q68CQ7 371 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 TRMT10AQ8TBZ6 339 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 DYNC2LI1Q8TCX1 351 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 NPRL2Q8WTW4 380 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 SPACA5Q96QH8 159 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 UQCC2Q9BRT2 126 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 SSBP3Q9BWW4 388 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 DCSTAMPQ9H295 470 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 NOTCH3Q9UM47 2321 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 CCDC160A6NGH7 325 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 NOTOA8MTQ0 251 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 TNFSF4P23510 183 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 MPZP25189 248 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 SRP9P49458 86 aaKnown RBP11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 BTG1P62324 171 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 TNFAIP6P98066 277 aaPredicted RBP11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 MXD1Q05195 221 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 TMEM155Q4W5P6 130 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 ASCL4Q6XD76 172 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 Q6ZTK2 550 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 ZNF573Q86YE8 665 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 CALHM1Q8IU99 346 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 TBC1D15Q8TC07 691 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 ITLN1Q8WWA0 313 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 SLC25A46Q96AG3 418 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 OR2V2Q96R30 315 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 BARHL1Q9BZE3 327 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 PKIBQ9C010 78 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 CNTD2Q9H8S5 307 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 TMEM106BQ9NUM4 274 aa11.44□□□□□ -0.58
SHKBP1-218ENST00000598907 IFITM5A6NNB3 132 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 CEACAM18A8MTB9 384 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 K7EIL1 84 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 SLC17A2O00624 439 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 TMEM127O75204 238 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 ACAA1P09110 424 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 OCMP0CE72 109 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 RPS2P15880 293 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 CFHR2P36980 270 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 HAAOP46952 286 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 CAV3P56539 151 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 FGF12P61328 243 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 PAX2Q02962 417 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 PDZK1IP1Q13113 114 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 MPPED2Q15777 294 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 DEFB121Q5J5C9 76 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 DHRS7BQ6IAN0 325 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 ANGPTL5Q86XS5 388 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 CROCCP3Q8IVE0 287 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 LYG1Q8N1E2 194 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 ZSCAN4Q8NAM6 433 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 SCCPDHQ8NBX0 429 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 OR4D6Q8NGJ1 314 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 AQP3Q92482 292 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 ERGIC1Q969X5 290 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 CPNE2Q96FN4 548 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
SHKBP1-218ENST00000598907 SMIM30A4D0T7 59 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 J3QT63 122 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 AIPO00170 330 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 GRPP07492 148 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 TNFRSF1AP19438 455 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 PMELP40967 661 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 PTGFRP43088 359 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 OR3A4PP47883 348 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 COL10A1Q03692 680 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 CD69Q07108 199 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 IL24Q13007 206 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 PRAMEF6Q5VXH4 476 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 SFXN4Q6P4A7 337 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 SAXO1Q8IYX7 474 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 JAGN1Q8N5M9 183 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 PXT1Q8NFP0 134 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 OR6M1Q8NGM8 313 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 Q8TCH9 128 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 RAB40AQ8WXH6 277 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 RFT1Q96AA3 541 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 NKX3-1Q99801 234 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 GCM1Q9NP62 436 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
SHKBP1-218ENST00000598907 IGKV1-12A0A0C4DH73 117 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 CDIPTO14735 213 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 GPR37O15354 613 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 NOS1APO75052 506 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 IGKV1D-12P01611 117 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 SFTPBP07988 381 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 SLC2A2P11168 524 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 HTR2CP28335 458 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 RORCP51449 518 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 HERPUD1Q15011 391 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms