RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ERGIC1Q969X5 290 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 ZNF488Q96MN9 340 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 OR2V2Q96R30 315 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 PECRQ9BY49 303 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 ZMAT3Q9HA38 289 aaKnown RBP11.37□□□□□ -0.59
VMP1-217ENST00000593168 HES4Q9HCC6 221 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 PLEKHJ1Q9NW61 149 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 KLK11Q9UBX7 282 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 PTTG1O95997 202 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 FUT3P21217 361 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 GNG2P59768 71 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 AP3S2P59780 193 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 ACTBP60709 375 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 ACTG1P63261 375 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 TNFAIP6P98066 277 aaPredicted RBP11.36□□□□□ -0.59
VMP1-217ENST00000593168 GUCA2AQ02747 115 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 DYRK1AQ13627 763 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 KLF9Q13886 244 aaPredicted RBP11.36□□□□□ -0.59
VMP1-217ENST00000593168 MST1LQ2TV78 715 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 FAM209AQ5JX71 171 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 EMG1Q92979 244 aaKnown RBP11.36□□□□□ -0.59
VMP1-217ENST00000593168 NEDD4LQ96PU5 975 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 C7orf50Q9BRJ6 194 aaKnown RBP11.36□□□□□ -0.59
VMP1-217ENST00000593168 MS4A5Q9H3V2 200 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 FN3KRPQ9HA64 309 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 SPACA1Q9HBV2 294 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 C1orf123Q9NWV4 160 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 ZNF107Q9UII5 783 aaPredicted RBP11.36□□□□□ -0.59
VMP1-217ENST00000593168 NSD1Q96L73 2696 aaPredicted RBP11.36□□□□□ -0.59
VMP1-217ENST00000593168 ROS1P08922 2347 aa11.36□□□□□ -0.59
VMP1-217ENST00000593168 IGHV3-64DA0A0J9YX35 117 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 LINC00854A0A1B0GVQ3 168 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 ANKRD20A5PA0PJZ0 165 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 CENPXA8MT69 81 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 PDCD6O75340 191 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 OR7C1O76099 320 aaPredicted RBP11.35□□□□□ -0.59
VMP1-217ENST00000593168 NXPH2O95156 264 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 GOSR1O95249 250 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 GLAP06280 429 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 PRKACAP17612 351 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 TNFRSF1AP19438 455 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 SWI5Q1ZZU3 235 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 PCGF3Q3KNV8 242 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 MZT2BQ6NZ67 158 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 FIP1L1Q6UN15 594 aaKnown RBP11.35□□□□□ -0.59
VMP1-217ENST00000593168 ZNF826PQ6ZT77 177 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 BATF2Q8N1L9 274 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 WFDC11Q8NEX6 87 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 Q8TCH9 128 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 ITLN1Q8WWA0 313 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 COX4I2Q96KJ9 171 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 C11orf54Q9H0W9 315 aaPredicted RBP11.35□□□□□ -0.59
VMP1-217ENST00000593168 IFT22Q9H7X7 185 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 UFSP2Q9NUQ7 469 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 RASL12Q9NYN1 266 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 RCC2Q9P258 522 aaKnown RBP11.35□□□□□ -0.59
VMP1-217ENST00000593168 FBXO9Q9UK97 447 aaPredicted RBP11.35□□□□□ -0.59
VMP1-217ENST00000593168 ELF5Q9UKW6 265 aaPredicted RBP11.35□□□□□ -0.59
VMP1-217ENST00000593168 CACNG2Q9Y698 323 aa11.35□□□□□ -0.59
VMP1-217ENST00000593168 A6NNC1 897 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 LYRM1O43325 122 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 SSX5O60225 188 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 CSF1P09603 554 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 GLRA1P23415 457 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 RCVRNP35243 200 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 CBX5P45973 191 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 ARFRP1Q13795 201 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 ZNF146Q15072 292 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 TRIM16LQ309B1 348 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 SPIN3Q5JUX0 258 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 NKAPLQ5M9Q1 402 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 DCDC5Q6ZRR9 648 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 GDPD3Q7L5L3 318 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 C6orf201Q7Z4U5 140 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 TRAPPC6BQ86SZ2 158 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 RTN4RL2Q86UN3 420 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 CENPSQ8N2Z9 138 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 MUC15Q8N387 334 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 MBD6Q96DN6 1003 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 OCSTAMPQ9BR26 566 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 EGLN1Q9GZT9 426 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 ANAPC10Q9UM13 185 aa11.34□□□□□ -0.59
VMP1-217ENST00000593168 hCG_1807616A0A1W2PRN6 198 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 NAP1L6A6NFF2 107 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 SRRM5B3KS81 715 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 KNG1P01042 644 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 LHBP01229 141 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 NAT1P18440 290 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 RFX2P48378 723 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 SNU13P55769 128 aaKnown RBP11.33□□□□□ -0.6
VMP1-217ENST00000593168 TAS2R19P59542 299 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 IKZF1Q13422 519 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 PDCD1Q15116 288 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 SPRNQ5BIV9 151 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 ATAD3CQ5T2N8 411 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 OLFML2AQ68BL7 652 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 Q6P435 159 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 ACP7Q6ZNF0 438 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 Q6ZNX1 250 aa11.33□□□□□ -0.6
VMP1-217ENST00000593168 MOGAT3Q86VF5 341 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms