RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ALKBH1Q13686 389 aaKnown RBP8.41□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF273Q14593 569 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 LY6EQ16553 131 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 BEAN1Q3B7T3 259 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 FBLN7Q53RD9 439 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 OR2G6Q5TZ20 316 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 LAIR2Q6ISS4 152 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 IZUMO2Q6UXV1 221 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 C1QL4Q86Z23 238 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF676Q8N7Q3 588 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 OR11H6Q8NGC7 330 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 OR4M1Q8NGD0 313 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 OR10AC1Q8NH08 325 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 TFAP2CQ92754 450 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 FGF20Q9NP95 211 aaPredicted RBP8.41□□□□□ -1.06
VPS4B-207ENST00000591519 CLEC2DQ9UHP7 191 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 FOXJ3Q9UPW0 622 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 TBL2Q9Y4P3 447 aaKnown RBP8.41□□□□□ -1.06
VPS4B-207ENST00000591519 FAM230AA0A1W2PPH8 454 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 CHST1O43916 411 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF737O75373 536 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 CHRM2P08172 466 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 UBCP0CG48 685 aaKnown RBP8.4□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF20P17024 532 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 MYL12AP19105 171 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 PAX6P26367 422 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 CEBPDP49716 269 aaPredicted RBP8.4□□□□□ -1.06
VPS4B-207ENST00000591519 DYNLT3P51808 116 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 BMXP51813 675 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 GTF2A1P52655 376 aaPredicted RBP8.4□□□□□ -1.06
VPS4B-207ENST00000591519 EMX1Q04741 257 aaPredicted RBP8.4□□□□□ -1.06
VPS4B-207ENST00000591519 ST3GAL4Q11206 333 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 CCBE1Q6UXH8 406 aaPredicted RBP8.4□□□□□ -1.06
VPS4B-207ENST00000591519 AHSA2Q719I0 299 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 KCTD20Q7Z5Y7 419 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 LHFPL4Q7Z7J7 247 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 ANGPTL5Q86XS5 388 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 DYNAPQ8N1N2 210 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 STX19Q8N4C7 294 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 KLHDC1Q8N7A1 406 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 CCDC54Q8NEL0 328 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 OR51A4Q8NGJ6 313 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 OR13C3Q8NGS6 347 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 WIPF2Q8TF74 440 aaPredicted RBP8.4□□□□□ -1.06
VPS4B-207ENST00000591519 TMEM80Q96HE8 168 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 PDCD1LG2Q9BQ51 273 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF649Q9BS31 505 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 VCX3BQ9H321 246 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 INPP5EQ9NRR6 644 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 SERTAD4Q9NUC0 356 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 MRPS18AQ9NVS2 196 aaKnown RBP8.4□□□□□ -1.06
VPS4B-207ENST00000591519 HSPE1-MOB4S4R3N1 261 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 DSCAML1Q8TD84 2053 aa8.4□□□□□ -1.06
VPS4B-207ENST00000591519 KRTAP4-8A0A0G2JLE6 195 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 TRBV2A0A0J9YWF9 115 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 PNMA8CA0A1B0GUJ8 204 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 IRGMA1A4Y4 181 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 A6NDX4 124 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 EFCAB10A6NFE3 127 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 ODF3BA8MYP8 253 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 PTGES3LE9PB15 166 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 G3V4G9 280 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 ZNF728P0DKX0 622 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 COX7A1P24310 79 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 DCKP27707 260 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 MEF2CQ06413 473 aaPredicted RBP8.39□□□□□ -1.07
VPS4B-207ENST00000591519 UBE2V2Q15819 145 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 LDLRAD2Q5SZI1 272 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 TMEM244Q5VVB8 128 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 ZNF626Q68DY1 528 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 XAF1Q6GPH4 301 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 TMPRSS11AQ6ZMR5 421 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 SYS1Q8N2H4 156 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 ZFP41Q8N8Y5 198 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 OR13D1Q8NGV5 346 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 TSEN15Q8WW01 171 aaKnown RBP8.39□□□□□ -1.07
VPS4B-207ENST00000591519 FGGYQ96C11 551 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 FOXRED1Q96CU9 486 aaPredicted RBP8.39□□□□□ -1.07
VPS4B-207ENST00000591519 C10orf35Q96D05 121 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 ADAT3Q96EY9 351 aaPredicted RBP8.39□□□□□ -1.07
VPS4B-207ENST00000591519 SNX22Q96L94 193 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 MYCBPQ99417 103 aaPredicted RBP8.39□□□□□ -1.07
VPS4B-207ENST00000591519 WNT10AQ9GZT5 417 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 ZNF702PQ9H963 129 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 CHCHD3Q9NX63 227 aaKnown RBP8.39□□□□□ -1.07
VPS4B-207ENST00000591519 MTCH1Q9NZJ7 389 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 OR14J1Q9UGF5 321 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 DIMT1Q9UNQ2 313 aaKnown RBP8.39□□□□□ -1.07
VPS4B-207ENST00000591519 SLC7A11Q9UPY5 501 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 TCF19Q9Y242 345 aa8.39□□□□□ -1.07
VPS4B-207ENST00000591519 EXOSC1Q9Y3B2 195 aaKnown RBP8.39□□□□□ -1.07
VPS4B-207ENST00000591519 OR4C45A6NMZ5 311 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 F8VVB4 439 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 F8VWA3 439 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 OCM2P0CE71 109 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 OCMP0CE72 109 aaPredicted RBP8.38□□□□□ -1.07
VPS4B-207ENST00000591519 IGHV1-8P0DP01 117 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 SOX2P48431 317 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 RAB13P51153 203 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 FUT6P51993 359 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms