RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 RTN4IP1Q8WWV3 396 aaPredicted RBP6.4□□□□□ -1.38
ZNF540-206ENST00000589117 TOMM40LQ969M1 308 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 GALNT14Q96FL9 552 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 LRRC46Q96FV0 321 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 RNF122Q9H9V4 155 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 TAF9BQ9HBM6 251 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 MMP26Q9NRE1 261 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 COQ3Q9NZJ6 369 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 MYO15AQ9UKN7 3530 aa6.4□□□□□ -1.39
ZNF540-206ENST00000589117 E5RGE8 158 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 H0YIZ8 118 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 RPL36A-HNRNPH2H7BZ11 118 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 GEMIN2O14893 280 aaKnown RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 DIRAS3O95661 229 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 PATE4P0C8F1 98 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 CD40P25942 277 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 OPRM1P35372 400 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 RBM11P57052 281 aaKnown RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 PLGLB1Q02325 96 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 SRYQ05066 204 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 FOXO1Q12778 655 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 RBM39Q14498 530 aaKnown RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 RNPS1Q15287 305 aaKnown RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 PXDC1Q5TGL8 231 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 MRPL21Q7Z2W9 205 aaKnown RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 MKXQ8IYA7 352 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 SPAG16Q8N0X2 631 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 LGI3Q8N145 548 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 OR2C3Q8N628 320 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 DEFB123Q8N688 67 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 TMED6Q8WW62 240 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 PSMF1Q92530 271 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 APOBEC3DQ96AK3 386 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 LOXL4Q96JB6 756 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 FER1L6-AS2Q96M78 137 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 DMRTA2Q96SC8 542 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 TSNAXQ99598 290 aaKnown RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 NAA60Q9H7X0 242 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 OR2S2Q9NQN1 319 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 DEPPQ9NTK1 212 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 OR5AC2Q9NZP5 309 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 LPAR3Q9UBY5 353 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 NSG2Q9Y328 171 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 EML6Q6ZMW3 1958 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 IGKV1-27A0A075B6S5 117 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 BORCS7-ASMTA0A0B4J1R7 106 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 TMEM218A2RU14 115 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF724A8MTY0 619 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 KLRC4-KLRK1H3BQV0 150 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 MASP2O00187 686 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 DEDDO75618 318 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 OR7C1O76099 320 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 ATG12O94817 140 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 GAPDHP04406 335 aaKnown RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 MMP7P09237 267 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 CD79AP11912 226 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 CCNOP22674 350 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 ITGA3P26006 1051 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 DUSP1P28562 367 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 S100GP29377 79 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 FCGR2CP31995 323 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 PTGER4P35408 488 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 RRADP55042 308 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 ARF1P84077 181 aaKnown RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 IL15RAQ13261 267 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 LPAL2Q16609 132 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 SRSF7Q16629 238 aaKnown RBP eCLIP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 TSPO2Q5TGU0 170 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 GPR157Q5UAW9 335 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 SLC22A25Q6T423 547 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 COLCA1Q6ZS62 124 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 BEND4Q6ZU67 534 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 FOXRED2Q8IWF2 684 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 Q8N1Y9 231 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF611Q8N823 705 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 LRTM2Q8N967 370 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 OR1S2Q8NGQ3 325 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 WFDC12Q8WWY7 111 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 APH1AQ96BI3 265 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 RRNAD1Q96FB5 475 aaKnown RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF845Q96IR2 970 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 GUCD1Q96NT3 240 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 PRRX2Q99811 253 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 SULT4A1Q9BR01 284 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 PAPOLGQ9BWT3 736 aaKnown RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 NKX6-2Q9C056 277 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 SLC5A7Q9GZV3 580 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 ARRDC1-AS1Q9H2J1 176 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 PLK3Q9H4B4 646 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 SPACA1Q9HBV2 294 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 KLF13Q9Y2Y9 288 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 TRIOBPQ9H2D6 2365 aa6.39□□□□□ -1.39
ZNF540-206ENST00000589117 NCOA6Q14686 2063 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-206ENST00000589117 MPTX1A8MV57 137 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 TK1P04183 234 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 CTXN2P0C2S0 81 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 LHX2P50458 406 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 FXYD4P59646 89 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 HGFACQ04756 655 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF273Q14593 569 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms