RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 REEP1Q9H902 201 aa17.08■□□□□ 0.32
CAPNS1-205ENST00000588780 AMMECR1Q9Y4X0 333 aaPredicted RBP17.08■□□□□ 0.32
CAPNS1-205ENST00000588780 V9GYS6 101 aa17.08■□□□□ 0.32
CAPNS1-205ENST00000588780 LY6LH3BQJ8 138 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 AP4M1O00189 453 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 E2F6O75461 281 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 CD34P28906 385 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 PTGFRP43088 359 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 OR3A1P47881 315 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 CDX1P47902 265 aaPredicted RBP17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 INSL3P51460 131 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 ZNF91Q05481 1191 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 SLC35D3Q5M8T2 416 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 ZNF679Q8IYX0 411 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 BBS1Q8NFJ9 593 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 OR14K1Q8NGZ2 314 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 TAS2R3Q9NYW6 316 aa17.07■□□□□ 0.32
CAPNS1-205ENST00000588780 LINC01548A6NM66 108 aa17.06■□□□□ 0.32
CAPNS1-205ENST00000588780 NCBP2LA6PVI3 153 aaKnown RBP17.06■□□□□ 0.32
CAPNS1-205ENST00000588780 H3BSH0 61 aa17.06■□□□□ 0.32
CAPNS1-205ENST00000588780 CYB5AP00167 134 aa17.06■□□□□ 0.32
CAPNS1-205ENST00000588780 IGKV1D-33P01593 117 aa17.06■□□□□ 0.32
CAPNS1-205ENST00000588780 IGKV1-33P01594 117 aa17.06■□□□□ 0.32
CAPNS1-205ENST00000588780 PRKACAP17612 351 aa17.06■□□□□ 0.32
CAPNS1-205ENST00000588780 Q8IYB0 196 aa17.06■□□□□ 0.32
CAPNS1-205ENST00000588780 NIPSNAP1Q9BPW8 284 aa17.06■□□□□ 0.32
CAPNS1-205ENST00000588780 RBFOX1Q9NWB1 397 aaKnown RBP17.06■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM90A18PA6NE21 464 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM90A16PA6NEW6 464 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM90A20PA6NIJ5 464 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM90A9PA6NNJ1 464 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM90A12PA8MX19 464 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM90A5PA8MXJ8 464 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM90A15PP0C7V4 464 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM90A13PP0C7W8 464 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM90A14PP0C7W9 464 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM90A24PP0C7X0 464 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 HSD17B1P14061 328 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 GLIPR1P48060 266 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 AESQ08117 197 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FOXE3Q13461 319 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 APOFQ13790 326 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 GINS1Q14691 196 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 FAM58AQ8N1B3 248 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 OR11H1Q8NG94 326 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 OR10G2Q8NGC3 310 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 OR9G1Q8NH87 305 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 ASB17Q8WXJ9 295 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 BORCS8Q96FH0 119 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 CCDC134Q9H6E4 229 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 MOB1AQ9H8S9 216 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 OR52A1Q9UKL2 312 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 TMEM14AQ9Y6G1 99 aa17.05■□□□□ 0.32
CAPNS1-205ENST00000588780 SASH3O75995 380 aa17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 IGHV3-7P01780 117 aa17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 HMGN1P05114 100 aa17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 POU3F4P49335 361 aa17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 FUT6P51993 359 aa17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 BNIP1Q12981 228 aa17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 ODF4Q2M2E3 257 aa17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 CYP2R1Q6VVX0 501 aa17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 ELMOD2Q8IZ81 293 aa17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 C4orf3Q8WVX3 66 aa17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 EXOSC4Q9NPD3 245 aaKnown RBP17.04■□□□□ 0.32
CAPNS1-205ENST00000588780 LYSTQ99698 3801 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 IGKV1-27A0A075B6S5 117 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 PRR32B1ATL7 298 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 CCRL2O00421 344 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 SH2D1BO14796 132 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 RRP9O43818 475 aaKnown RBP17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 ELANEP08246 267 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 HCKP08631 526 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 BCL3P20749 454 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 GPR12P47775 334 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 NPBWR2P48146 333 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 CDC42P60953 191 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 ROM1Q03395 351 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 SCN1BQ07699 218 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 C16orf89Q6UX73 402 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 PLEKHG7Q6ZR37 379 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 CORO2AQ92828 525 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 SEBOXQ9HB31 216 aaPredicted RBP17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 GSTK1Q9Y2Q3 226 aa17.03■□□□□ 0.32
CAPNS1-205ENST00000588780 A0A1B0GTI1 187 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 DHRS7CA6NNS2 312 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 GATBO75879 557 aaKnown RBP17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 SERPINA3P01011 423 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 ACTR3P61158 418 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 MADCAM1Q13477 382 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 UBE2V2Q15819 145 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 UTF1Q5T230 341 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 OR2T5Q6IEZ7 315 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 ZNF429Q86V71 674 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 OR2T29Q8NH02 315 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 LEAP2Q969E1 77 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 FEVQ99581 238 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 APOL4Q9BPW4 351 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 ISYNA1Q9NPH2 558 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 COPS3Q9UNS2 423 aa17.02■□□□□ 0.32
CAPNS1-205ENST00000588780 R4GMQ9 66 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms