RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 MALRD1Q5VYJ5 2156 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 A0A0A6YYD4 124 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 TRAV24A0A0B4J272 114 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 A8MXK9 166 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 SLC33A1O00400 549 aaPredicted RBP8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 DEGS1O15121 323 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 NDUFB3O43676 98 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 ZNF737O75373 536 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 PAHP00439 452 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 HEXAP06865 529 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 INHBBP09529 407 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 SNRPBP14678 240 aaKnown RBP8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 ZNF44P15621 663 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 LMO1P25800 156 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 EFNB2P52799 333 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 TMBIM6P55061 237 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 GNB2P62879 340 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 LCN2P80188 198 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 ESCO2Q56NI9 601 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 NHLRC3Q5JS37 347 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 IDNKQ5T6J7 187 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 SIGIRRQ6IA17 410 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 C17orf107Q6ZR85 190 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 USP43Q70EL4 1123 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 ZNF561Q8N587 486 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 TMEM185AQ8NFB2 350 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 KCNG3Q8TAE7 436 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 RAB2BQ8WUD1 216 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 ST8SIA4Q92187 359 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 ISOC1Q96CN7 298 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 MED30Q96HR3 178 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 Q96M66 194 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 NICN1Q9BSH3 213 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 TMEM59Q9BXS4 323 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 BARHL1Q9BZE3 327 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 CHST6Q9GZX3 395 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 RBM38Q9H0Z9 239 aaKnown RBP8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 CST11Q9H112 138 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 DCSTAMPQ9H295 470 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 PCDHB16Q9NRJ7 776 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 SLC25A10Q9UBX3 287 aaPredicted RBP8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 CLN8Q9UBY8 286 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 OR5V1Q9UGF6 321 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 GLS2Q9UI32 602 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 TEX15Q9BXT5 2789 aa8.88□□□□□ -0.99
SMARCA4-213ENST00000587988 B4DSR2 109 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 C22orf46C9J442 243 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 H3BMQ9 156 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 K7N7A8 449 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 HSPB6O14558 160 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 OR7C1O76099 320 aaPredicted RBP8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 TK1P04183 234 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 NDUFB7P17568 137 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 CPT2P23786 658 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 GABRR1P24046 479 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 NPY4RP50391 375 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 RPS27AP62979 156 aaKnown RBP8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 LRRC10Q5BKY1 277 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 CYB5R2Q6BCY4 276 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 BRICD5Q6PL45 260 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 BTN2A1Q7KYR7 527 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 OR2W3Q7Z3T1 314 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 BIVMQ86UB2 503 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 BPIFB2Q8N4F0 458 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 ASCC1Q8N9N2 400 aaKnown RBP8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 LINC01356Q8N9X3 169 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 OR4S1Q8NGB4 309 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 OR5H6Q8NGV6 325 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 SLC25A46Q96AG3 418 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 MRPS24Q96EL2 167 aaKnown RBP8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 SNX22Q96L94 193 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 TM2D1Q9BX74 207 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 LPAR5Q9H1C0 372 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 MMP26Q9NRE1 261 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 FBLN5Q9UBX5 448 aa8.87□□□□□ -0.99
SMARCA4-213ENST00000587988 DPPA5A6NC42 116 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 CCDC160A6NGH7 325 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 FOXH1O75593 365 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 TGFAP01135 160 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 MSMBP08118 114 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 ZNF16P17020 682 aaPredicted RBP8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 OR3A1P47881 315 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 GZMKP49863 264 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 PAX2Q02962 417 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 MPV17LQ2QL34 196 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 ATAD3CQ5T2N8 411 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 LINC00596Q86U02 117 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 RTN4RL2Q86UN3 420 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 SUMF2Q8NBJ7 301 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 OR4M1Q8NGD0 313 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 LGALS14Q8TCE9 139 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 H1FXQ92522 213 aaKnown RBP8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 DACT3Q96B18 629 aaPredicted RBP8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 BCL7BQ9BQE9 202 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM234AQ9H0X4 552 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 PPA2Q9H2U2 334 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 GSX1Q9H4S2 264 aaPredicted RBP8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 IFT22Q9H7X7 185 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 RAB22AQ9UL26 194 aa8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 POLR3KQ9Y2Y1 108 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms