RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 ZNF784Q8NCA9 323 aaPredicted RBP14.29□□□□□ -0.12
RANBP3-209ENST00000587411 NFAM1Q8NET5 270 aaPredicted RBP14.29□□□□□ -0.12
RANBP3-209ENST00000587411 TMEM171Q8WVE6 324 aa14.29□□□□□ -0.12
RANBP3-209ENST00000587411 ZNF799Q96GE5 643 aa14.29□□□□□ -0.12
RANBP3-209ENST00000587411 FAM210BQ96KR6 192 aa14.29□□□□□ -0.12
RANBP3-209ENST00000587411 TP53RKQ96S44 253 aa14.29□□□□□ -0.12
RANBP3-209ENST00000587411 CHD9Q3L8U1 2897 aa14.29□□□□□ -0.12
RANBP3-209ENST00000587411 MPPED1O15442 326 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 MMP9P14780 707 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 FKBP2P26885 142 aaKnown RBP14.28□□□□□ -0.12
RANBP3-209ENST00000587411 PNRC1Q12796 327 aaPredicted RBP14.28□□□□□ -0.12
RANBP3-209ENST00000587411 ASCL4Q6XD76 172 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 FOXL2NBQ6ZUU3 175 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 STX12Q86Y82 276 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 ZNF100Q8IYN0 542 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 SPTSSAQ969W0 71 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 TMEM222Q9H0R3 208 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 SLC7A11Q9UPY5 501 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 TDRD6O60522 2096 aaKnown RBP14.28□□□□□ -0.12
RANBP3-209ENST00000587411 ANGPTL7O43827 346 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 TRGC1P0CF51 173 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 FOLR1P15328 257 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 RND2P52198 227 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 CLDN17P56750 224 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 RPL23AP62750 156 aaKnown RBP14.28□□□□□ -0.12
RANBP3-209ENST00000587411 LBHQ53QV2 105 aaPredicted RBP14.28□□□□□ -0.12
RANBP3-209ENST00000587411 GFI1BQ5VTD9 330 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 SHISA6Q6ZSJ9 500 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 OR5L2Q8NGL0 311 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 OR5C1Q8NGR4 320 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 OR5R1Q8NH85 324 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 TGIF2Q9GZN2 237 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 RFNGQ9Y644 331 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 DNAH14Q0VDD8 3507 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 A0A1B0GV90 55 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 TERTO14746 1132 aaKnown RBP14.28□□□□□ -0.12
RANBP3-209ENST00000587411 SLC31A2O15432 143 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 RSPO1Q2MKA7 263 aaPredicted RBP14.28□□□□□ -0.12
RANBP3-209ENST00000587411 RCC1LQ96I51 464 aaKnown RBP14.28□□□□□ -0.12
RANBP3-209ENST00000587411 TMEM56Q96MV1 263 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 METTL7AQ9H8H3 244 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 TMEM56-RWDD3S4R434 201 aa14.28□□□□□ -0.12
RANBP3-209ENST00000587411 ARID1AO14497 2285 aa14.27□□□□□ -0.12
RANBP3-209ENST00000587411 KIAA0100Q14667 2235 aaKnown RBP14.27□□□□□ -0.12
RANBP3-209ENST00000587411 TRAV1-1A0A0B4J248 108 aa14.27□□□□□ -0.12
RANBP3-209ENST00000587411 ARGFXA6NJG6 315 aa14.27□□□□□ -0.12
RANBP3-209ENST00000587411 SPRY1O43609 319 aaPredicted RBP14.27□□□□□ -0.12
RANBP3-209ENST00000587411 FABP4P15090 132 aa14.27□□□□□ -0.12
RANBP3-209ENST00000587411 AADACP22760 399 aa14.27□□□□□ -0.12
RANBP3-209ENST00000587411 OMGP23515 440 aa14.27□□□□□ -0.12
RANBP3-209ENST00000587411 PDZD11Q5EBL8 140 aa14.27□□□□□ -0.12
RANBP3-209ENST00000587411 ANKRD37Q7Z713 158 aa14.27□□□□□ -0.12
RANBP3-209ENST00000587411 OR10AD1Q8NGE0 317 aa14.27□□□□□ -0.12
RANBP3-209ENST00000587411 FAM86C1Q9NVL1 165 aa14.27□□□□□ -0.12
RANBP3-209ENST00000587411 A0A087X0M5 115 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 LOC102723971A0A1B0GUV8 181 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 A0A1B0GX30 115 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 PROB1E7EW31 1015 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 SSSCA1O60232 199 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 PTGDSP41222 190 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 TAS2R60P59551 318 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 SHBQ15464 509 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 LHFPL2Q6ZUX7 228 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 ZNF695Q8IW36 515 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 CMTM1Q8IZ96 169 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 ABHD5Q8WTS1 349 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 FRZBQ92765 325 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 GLRX2Q9NS18 164 aa14.27□□□□□ -0.13
RANBP3-209ENST00000587411 TRBV11-1A0A0K0K1C0 115 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 DUXBA0A1W2PPF3 345 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 CLDN34H7C241 214 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 ONECUT2O95948 504 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 PAX1P15863 534 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 DYNLT3P51808 116 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 EXT1Q16394 746 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 DEFB133Q30KQ1 61 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 CPEB2Q7Z5Q1 589 aaKnown RBP14.26□□□□□ -0.13
RANBP3-209ENST00000587411 PLXDC1Q8IUK5 500 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 OR2M3Q8NG83 312 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 TMEM54Q969K7 222 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 NABP1Q96AH0 204 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 MEGF10Q96KG7 1140 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 PACRGQ96M98 296 aaPredicted RBP14.26□□□□□ -0.13
RANBP3-209ENST00000587411 PLSCR2Q9NRY7 297 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 ZNF581Q9P0T4 197 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 UBE2J1Q9Y385 318 aaPredicted RBP14.26□□□□□ -0.13
RANBP3-209ENST00000587411 SMCO3A2RU48 225 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 PPYP01298 95 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 RNF224P0DH78 156 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 CD200P41217 278 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 NOVA1P51513 510 aaKnown RBP14.26□□□□□ -0.13
RANBP3-209ENST00000587411 TMEM211Q6ICI0 200 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 DPPA2Q7Z7J5 298 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 OSR2Q8N2R0 312 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 DYRK2Q92630 601 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 PITPNC1Q9UKF7 332 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 RP1P56715 2156 aa14.26□□□□□ -0.13
RANBP3-209ENST00000587411 CLEC18AA5D8T8 446 aa14.25□□□□□ -0.13
RANBP3-209ENST00000587411 GEMIN2O14893 280 aaKnown RBP14.25□□□□□ -0.13
RANBP3-209ENST00000587411 SUMF1Q8NBK3 374 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms