RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 FAM90A23PA8MXZ1 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 INMT-MINDY4F8WBC2 141 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 RAB27BO00194 218 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 AKR7A2O43488 359 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 CRTAPO75718 401 aaPredicted RBP6.61□□□□□ -1.35
VMP1-204ENST00000587259 IGKV3-15P01624 115 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 IGLV1-44P01699 117 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 HPXP02790 462 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 TCRBP04435 133 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 MELTFP08582 738 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A15PP0C7V4 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A13PP0C7W8 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A14PP0C7W9 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A24PP0C7X0 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 PATE4P0C8F1 98 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM157BP0CG42 384 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 GTF2F2P13984 249 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 CBR1P16152 277 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 ZNF14P17017 642 aaPredicted RBP6.61□□□□□ -1.35
VMP1-204ENST00000587259 GIFP27352 417 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 HLA-DMAP28067 261 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 RBMXP38159 391 aaKnown RBP6.61□□□□□ -1.35
VMP1-204ENST00000587259 OR3A4PP47883 348 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 GNG2P59768 71 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 RPS27AP62979 156 aaKnown RBP6.61□□□□□ -1.35
VMP1-204ENST00000587259 MZT1Q08AG7 82 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 UNC119Q13432 240 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 MADCAM1Q13477 382 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 RSU1Q15404 277 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 RBMS2Q15434 407 aaKnown RBP6.61□□□□□ -1.35
VMP1-204ENST00000587259 EFNB3Q15768 340 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 UBE2V2Q15819 145 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 TATDN3Q17R31 274 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 PLA1AQ53H76 456 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 Q6ZTK2 550 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 BTN2A1Q7KYR7 527 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 NAA40Q86UY6 237 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 MDP1Q86V88 176 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 LRP11Q86VZ4 500 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 C3orf56Q8N813 242 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 TMEM229BQ8NBD8 167 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 OR2AE1Q8NHA4 323 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 CLDND2Q8NHS1 167 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FGFBP3Q8TAT2 258 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 AQP3Q92482 292 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 RAB3CQ96E17 227 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 SYT3Q9BQG1 590 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 PAPOLGQ9BWT3 736 aaKnown RBP6.61□□□□□ -1.35
VMP1-204ENST00000587259 MRPL37Q9BZE1 423 aaKnown RBP6.61□□□□□ -1.35
VMP1-204ENST00000587259 BCL2L14Q9BZR8 327 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 RAB1BQ9H0U4 201 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 DYNLRB1Q9NP97 96 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 IFT46Q9NQC8 304 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 HIF1ANQ9NWT6 349 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 ETAA1Q9NY74 926 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 MRPL15Q9P015 296 aaKnown RBP6.61□□□□□ -1.35
VMP1-204ENST00000587259 NLKQ9UBE8 527 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 PKD1L1Q8TDX9 2849 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 LOC105371242A0A075B767 164 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 LANCL1O43813 399 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 PEX14O75381 377 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 MPIG6BO95866 241 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 TMEM225BP0DP42 221 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 RAC2P15153 192 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 SPNP16150 400 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 HIST1H1DP16402 221 aaKnown RBP6.6□□□□□ -1.35
VMP1-204ENST00000587259 MGMTP16455 207 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 ACKR3P25106 362 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 RAD52P43351 418 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 EFNB2P52799 333 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 ZP1P60852 638 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 MRPS15P82914 257 aaKnown RBP6.6□□□□□ -1.35
VMP1-204ENST00000587259 GK2Q14410 553 aaPredicted RBP6.6□□□□□ -1.35
VMP1-204ENST00000587259 CEACAM21Q3KPI0 293 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 ZNF260Q3ZCT1 412 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 SLC22A6Q4U2R8 563 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 FBXW12Q6X9E4 464 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 ASCL4Q6XD76 172 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 PEG10Q86TG7 708 aaKnown RBP6.6□□□□□ -1.35
VMP1-204ENST00000587259 LINC00596Q86U02 117 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 ZNF573Q86YE8 665 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 MKXQ8IYA7 352 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 FAM89BQ8N5H3 189 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 CELF2-AS1Q8N7Q2 184 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 CHST4Q8NCG5 386 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 OR56B2PQ8NGI1 322 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 OR5A2Q8NGI9 324 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 OR51T1Q8NGJ9 327 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 PIGCQ92535 297 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 GCDHQ92947 438 aaPredicted RBP6.6□□□□□ -1.35
VMP1-204ENST00000587259 UPRTQ96BW1 309 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 PRRT1Q99946 306 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 GAL3ST1Q99999 423 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 SLC25A21Q9BQT8 299 aaPredicted RBP6.6□□□□□ -1.35
VMP1-204ENST00000587259 LPAR5Q9H1C0 372 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 C20orf85Q9H1P6 137 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 ELL3Q9HB65 397 aaPredicted RBP6.6□□□□□ -1.35
VMP1-204ENST00000587259 GPN1Q9HCN4 374 aaPredicted RBP6.6□□□□□ -1.35
VMP1-204ENST00000587259 HRASLSQ9HDD0 168 aa6.6□□□□□ -1.35
VMP1-204ENST00000587259 MYOZ1Q9NP98 299 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms