RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ABCB10Q9NRK6 738 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 FRRS1LQ9P0K9 344 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 EXOGQ9Y2C4 368 aaKnown RBP9□□□□□ -0.97
CCDC47-206ENST00000584112 GMPPBQ9Y5P6 360 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 LINC00312Q9Y6C7 94 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 FAM90A8PA6NJQ4 464 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 VGLL3A8MV65 326 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 ODF3BA8MYP8 253 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 E9PQ18 207 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 H3BNX3 289 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 J3QLW9 94 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 ARG1P05089 322 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 IGHV1-8P0DP01 117 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF19P17023 458 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 PRKACAP17612 351 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 BCL3P20749 454 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 GABRR1P24046 479 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 MRPL28Q13084 256 aaKnown RBP8.99□□□□□ -0.97
CCDC47-206ENST00000584112 EDDM3AQ14507 147 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF146Q15072 292 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 GRK1Q15835 563 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF626Q68DY1 528 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 ZFAND6Q6FIF0 208 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 CRIP3Q6Q6R5 217 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 Q6ZTK2 550 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 CBR4Q8N4T8 237 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF676Q8N7Q3 588 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 OR11H6Q8NGC7 330 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 OR13C3Q8NGS6 347 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 RPS4Y2Q8TD47 263 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 RNF166Q96A37 237 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-206ENST00000584112 MALSU1Q96EH3 234 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 Q96MT0 163 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 C9orf16Q9BUW7 83 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 CDCA4Q9BXL8 241 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 RHOFQ9HBH0 211 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 RBFOX1Q9NWB1 397 aaKnown RBP8.99□□□□□ -0.97
CCDC47-206ENST00000584112 PITPNC1Q9UKF7 332 aa8.99□□□□□ -0.97
CCDC47-206ENST00000584112 IGKV1-9A0A0C4DH69 117 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 TMEM82A0PJX8 343 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 FUOMA2VDF0 154 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 MGST3O14880 152 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 FADS2O95864 444 aaKnown RBP8.98□□□□□ -0.97
CCDC47-206ENST00000584112 IGHA1P01876 353 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 MT-ND2P03891 347 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 LYL1P12980 280 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 PAX6P26367 422 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 ERP29P30040 261 aaKnown RBP8.98□□□□□ -0.97
CCDC47-206ENST00000584112 NPBWR2P48146 333 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 EFNB2P52799 333 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 NANOS3P60323 173 aaKnown RBP8.98□□□□□ -0.97
CCDC47-206ENST00000584112 PDZK1IP1Q13113 114 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 ALKBH1Q13686 389 aaKnown RBP8.98□□□□□ -0.97
CCDC47-206ENST00000584112 GALEQ14376 348 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 HERPUD1Q15011 391 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 ZBTB49Q6ZSB9 765 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 LHFPL4Q7Z7J7 247 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 TRAPPC6BQ86SZ2 158 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 SYS1Q8N2H4 156 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 HAVCR2Q8TDQ0 301 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 LGALS12Q96DT0 336 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 PELI1Q96FA3 418 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 C4orf36Q96KX1 117 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 ALG8Q9BVK2 526 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 CHST6Q9GZX3 395 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 EXOSC4Q9NPD3 245 aaKnown RBP8.98□□□□□ -0.97
CCDC47-206ENST00000584112 INPP5EQ9NRR6 644 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 IL36RNQ9UBH0 155 aa8.98□□□□□ -0.97
CCDC47-206ENST00000584112 HUWE1Q7Z6Z7 4374 aaKnown RBP8.98□□□□□ -0.97
CCDC47-206ENST00000584112 MUC4Q99102 2169 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 MEX3AA1L020 520 aaKnown RBP8.97□□□□□ -0.97
CCDC47-206ENST00000584112 TMEM212A6NML5 194 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 OR4C45A6NMZ5 311 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 H3BUI4 141 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 SH2D1BO14796 132 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 CCDC159P0C7I6 412 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 DBTP11182 482 aaKnown RBP8.97□□□□□ -0.97
CCDC47-206ENST00000584112 DUSP1P28562 367 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 SNU13P55769 128 aaKnown RBP8.97□□□□□ -0.97
CCDC47-206ENST00000584112 RAB40BQ12829 278 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 DYNC1I2Q13409 638 aaKnown RBP8.97□□□□□ -0.97
CCDC47-206ENST00000584112 SSX2Q16385 188 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 PLA1AQ53H76 456 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 MINOS1Q5TGZ0 78 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 TCF23Q7RTU1 214 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 LHFPL3Q86UP9 236 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 SAXO1Q8IYX7 474 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 OR52N4Q8NGI2 321 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 OR51A4Q8NGJ6 313 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 OR13C9Q8NGT0 318 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 PIFOQ8TCI5 191 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 RFT1Q96AA3 541 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 NKX3-1Q99801 234 aaPredicted RBP8.97□□□□□ -0.97
CCDC47-206ENST00000584112 CLEC7AQ9BXN2 247 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 COMMD4Q9H0A8 199 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 ZCCHC4Q9H5U6 513 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 HMG20AQ9NP66 347 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 PALMDQ9NP74 551 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 TCF19Q9Y242 345 aa8.97□□□□□ -0.97
CCDC47-206ENST00000584112 GSTK1Q9Y2Q3 226 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms